PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Falbscaffold917_cov1940277210 faidherbia_albida Falbscaffold917_cov1940277210
Fjavscaffold_10022200 fissidens_javanicus Fjavscaffold_10022200
Fjavscaffold_130071060 fissidens_javanicus Fjavscaffold_130071060
Fjavscaffold_30124860 fissidens_javanicus Fjavscaffold_30124860
Fjavscaffold_50193280 fissidens_javanicus Fjavscaffold_50193280
Fjavscaffold_70226140 fissidens_javanicus Fjavscaffold_70226140
Fontinalis2138440005730 fontinalis Fontinalis2138440005730
Fontinalis2780710090140 fontinalis Fontinalis2780710090140
Fontinalis2807840147220 fontinalis Fontinalis2807840147220
Fontinalis2827570207060 fontinalis Fontinalis2827570207060
Fontinalis2828360209940 fontinalis Fontinalis2828360209940
Fant1267330004360.1 fontinalis_antipyretica Fant1267330004360.1
Fant1733530046200.1 fontinalis_antipyretica Fant1733530046200.1
Fant1735120047200.1 fontinalis_antipyretica Fant1735120047200.1
Fant1780760093460.1 fontinalis_antipyretica Fant1780760093460.1
Fsul2138440005730 fontinalis_sullivantii Fsul2138440005730
Fsul2780710090140 fontinalis_sullivantii Fsul2780710090140
Fsul2807840147220 fontinalis_sullivantii Fsul2807840147220
Fsul2827570207060 fontinalis_sullivantii Fsul2827570207060
Fsul2828360209940 fontinalis_sullivantii Fsul2828360209940
fortunella_hindsii_sjg026830.1 fortunella_hindsii fortunella_hindsii_sjg026830.1
fortunella_hindsii_sjg055910.1 fortunella_hindsii fortunella_hindsii_sjg055910.1
fortunella_hindsii_sjg166160.1 fortunella_hindsii fortunella_hindsii_sjg166160.1
fortunella_hindsii_sjg225430.1 fortunella_hindsii fortunella_hindsii_sjg225430.1
fortunella_hindsii_sjg280680.1 fortunella_hindsii fortunella_hindsii_sjg280680.1
Fossombronia4260188900 fossombronia Fossombronia4260188900
Fossombronia4260188920 fossombronia Fossombronia4260188920
Fossombronia6890267810 fossombronia Fossombronia6890267810
Fossombronia8450348580 fossombronia Fossombronia8450348580
FanaFAN_r2.3ch00010970 fragaria_ananassa FanaFAN_r2.3ch00010970