PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
HhamSuperscaffold60951150 hibiscus_hamabo HhamSuperscaffold60951150
HhamSuperscaffold70964040 hibiscus_hamabo HhamSuperscaffold70964040
HhamSuperscaffold81006340 hibiscus_hamabo HhamSuperscaffold81006340
HhamSuperscaffold81024150 hibiscus_hamabo HhamSuperscaffold81024150
hippophae_rhamnoides_Hiprha1gene02838 hippophae_rhamnoides hippophae_rhamnoides_Hiprha1gene02838
hippophae_rhamnoides_Hiprha1gene16792 hippophae_rhamnoides hippophae_rhamnoides_Hiprha1gene16792
hippophae_rhamnoides_Hiprha1gene19490 hippophae_rhamnoides hippophae_rhamnoides_Hiprha1gene19490
hippophae_rhamnoides_Hiprha1gene21984 hippophae_rhamnoides hippophae_rhamnoides_Hiprha1gene21984
hirschfeldia_incana_HINC_NIJ_V1_G0026990.1 hirschfeldia_incana hirschfeldia_incana_HINC_NIJ_V1_G0026990.1
hirschfeldia_incana_HINC_NIJ_V1_G0042800.1 hirschfeldia_incana hirschfeldia_incana_HINC_NIJ_V1_G0042800.1
hirschfeldia_incana_HINC_NIJ_V1_G0042810.1 hirschfeldia_incana hirschfeldia_incana_HINC_NIJ_V1_G0042810.1
hirschfeldia_incana_HINC_NIJ_V1_G0091350.1 hirschfeldia_incana hirschfeldia_incana_HINC_NIJ_V1_G0091350.1
hirschfeldia_incana_HINC_NIJ_V1_G0119570.1 hirschfeldia_incana hirschfeldia_incana_HINC_NIJ_V1_G0119570.1
hirschfeldia_incana_HINC_NIJ_V1_G0168940.1 hirschfeldia_incana hirschfeldia_incana_HINC_NIJ_V1_G0168940.1
hirschfeldia_incana_HINC_NIJ_V1_G0197150.1 hirschfeldia_incana hirschfeldia_incana_HINC_NIJ_V1_G0197150.1
hirschfeldia_incana_HINC_NIJ_V1_G0245260.1 hirschfeldia_incana hirschfeldia_incana_HINC_NIJ_V1_G0245260.1
hirschfeldia_incana_HINC_NIJ_V1_G0249910.1 hirschfeldia_incana hirschfeldia_incana_HINC_NIJ_V1_G0249910.1
hirschfeldia_incana_HINC_NIJ_V1_G0258040.1 hirschfeldia_incana hirschfeldia_incana_HINC_NIJ_V1_G0258040.1
Hsca1366980024810 homaliodendron_scalpellifolium Hsca1366980024810
Hsca1542390053150 homaliodendron_scalpellifolium Hsca1542390053150
Hsca1610420082960 homaliodendron_scalpellifolium Hsca1610420082960
Hsca1651820163640 homaliodendron_scalpellifolium Hsca1651820163640
Hsca1654900173980 homaliodendron_scalpellifolium Hsca1654900173980
Hsca1962520252330 homaliodendron_scalpellifolium Hsca1962520252330
Hsca1962530252400 homaliodendron_scalpellifolium Hsca1962530252400