PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Hcilscaffold_100038930 hedwigia_ciliata Hcilscaffold_100038930
Hcilscaffold_60154970 hedwigia_ciliata Hcilscaffold_60154970
Hcilscaffold_70201400 hedwigia_ciliata Hcilscaffold_70201400
Hcilscaffold_90230260 hedwigia_ciliata Hcilscaffold_90230260
Hann01G0002480.1 helianthus_annuus Hann01G0002480.1
Hann07G0004280.1 helianthus_annuus Hann07G0004280.1
Hann14G0014810.1 helianthus_annuus Hann14G0014810.1
Hann14G0018780.1 helianthus_annuus Hann14G0018780.1
heliophila_variabilis_HV01G012280 heliophila_variabilis heliophila_variabilis_HV01G012280
heliophila_variabilis_HV04G018090 heliophila_variabilis heliophila_variabilis_HV04G018090
heliophila_variabilis_HV04G032000 heliophila_variabilis heliophila_variabilis_HV04G032000
heliophila_variabilis_HV04G032010 heliophila_variabilis heliophila_variabilis_HV04G032010
heliophila_variabilis_HV06G002400 heliophila_variabilis heliophila_variabilis_HV06G002400
heliophila_variabilis_HV07G013170 heliophila_variabilis heliophila_variabilis_HV07G013170
heliophila_variabilis_HV09G014470 heliophila_variabilis heliophila_variabilis_HV09G014470
HhamSuperscaffold100064160 hibiscus_hamabo HhamSuperscaffold100064160
HhamSuperscaffold160205510 hibiscus_hamabo HhamSuperscaffold160205510
HhamSuperscaffold170228010 hibiscus_hamabo HhamSuperscaffold170228010
HhamSuperscaffold190275630 hibiscus_hamabo HhamSuperscaffold190275630
HhamSuperscaffold210365180 hibiscus_hamabo HhamSuperscaffold210365180
HhamSuperscaffold280507330 hibiscus_hamabo HhamSuperscaffold280507330
HhamSuperscaffold280508490 hibiscus_hamabo HhamSuperscaffold280508490
HhamSuperscaffold290525690 hibiscus_hamabo HhamSuperscaffold290525690
HhamSuperscaffold30583240 hibiscus_hamabo HhamSuperscaffold30583240
HhamSuperscaffold390732880 hibiscus_hamabo HhamSuperscaffold390732880
HhamSuperscaffold390735440 hibiscus_hamabo HhamSuperscaffold390735440
HhamSuperscaffold40750270 hibiscus_hamabo HhamSuperscaffold40750270
HhamSuperscaffold40752830 hibiscus_hamabo HhamSuperscaffold40752830
HhamSuperscaffold410803200 hibiscus_hamabo HhamSuperscaffold410803200
HhamSuperscaffold50904120 hibiscus_hamabo HhamSuperscaffold50904120