PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Gossypium-turneri-TURN-v1.0.a2-publish_TURN.05g121600.m01.polypeptide gossypium_turneri Gossypium-turneri-TURN-v1.0.a2-publish_TURN.05g121600.m01.polypeptide
Gossypium-turneri-TURN-v1.0.a2-publish_TURN.09g245200.m01.polypeptide gossypium_turneri Gossypium-turneri-TURN-v1.0.a2-publish_TURN.09g245200.m01.polypeptide
GobtHiC_scaffold_10002150 grimmia_obtusifolia GobtHiC_scaffold_10002150
GobtHiC_scaffold_20102430 grimmia_obtusifolia GobtHiC_scaffold_20102430
GobtHiC_scaffold_60205640 grimmia_obtusifolia GobtHiC_scaffold_60205640
GobtHiC_scaffold_80257460 grimmia_obtusifolia GobtHiC_scaffold_80257460
GangGan011975170376000.1 guadua_angustifolia GangGan011975170376000.1
gynandropsis_gynandra_Gyn_10X_HIC_v5_00000208.mRNA1 gynandropsis_gynandra gynandropsis_gynandra_Gyn_10X_HIC_v5_00000208.mRNA1
gynandropsis_gynandra_Gyn_10X_HIC_v5_00006334.mRNA1 gynandropsis_gynandra gynandropsis_gynandra_Gyn_10X_HIC_v5_00006334.mRNA1
gynandropsis_gynandra_Gyn_10X_HIC_v5_00012990.mRNA1 gynandropsis_gynandra gynandropsis_gynandra_Gyn_10X_HIC_v5_00012990.mRNA1
gynandropsis_gynandra_Gyn_10X_HIC_v5_00023003.mRNA1 gynandropsis_gynandra gynandropsis_gynandra_Gyn_10X_HIC_v5_00023003.mRNA1
gynandropsis_gynandra_Gyn_10X_HIC_v5_00026036.mRNA1 gynandropsis_gynandra gynandropsis_gynandra_Gyn_10X_HIC_v5_00026036.mRNA1
gynandropsis_gynandra_Gyn_10X_HIC_v5_00027513.mRNA1 gynandropsis_gynandra gynandropsis_gynandra_Gyn_10X_HIC_v5_00027513.mRNA1
gypsophila_paniculata_Gpan04g01019.m1 gypsophila_paniculata gypsophila_paniculata_Gpan04g01019.m1
gypsophila_paniculata_Gpan06g00292.m1 gypsophila_paniculata gypsophila_paniculata_Gpan06g00292.m1
gypsophila_paniculata_Gpan12g01143.m1 gypsophila_paniculata gypsophila_paniculata_Gpan12g01143.m1
gypsophila_paniculata_Gpan16g00381.m1 gypsophila_paniculata gypsophila_paniculata_Gpan16g00381.m1
haloxylon_ammodendron_SS00906.t1 haloxylon_ammodendron haloxylon_ammodendron_SS00906.t1
haloxylon_ammodendron_SS03859.t1 haloxylon_ammodendron haloxylon_ammodendron_SS03859.t1
haloxylon_ammodendron_SS06619.t1 haloxylon_ammodendron haloxylon_ammodendron_SS06619.t1
haloxylon_ammodendron_SS34043.t1 haloxylon_ammodendron haloxylon_ammodendron_SS34043.t1
haloxylon_ammodendron_SS35335.t1 haloxylon_ammodendron haloxylon_ammodendron_SS35335.t1
haloxylon_ammodendron_SS35337.t1 haloxylon_ammodendron haloxylon_ammodendron_SS35337.t1
HimpHimp2_scaffold_119670022560.1 handroanthus_impetiginosus HimpHimp2_scaffold_119670022560.1
HimpHimp2_scaffold_17440060370.1 handroanthus_impetiginosus HimpHimp2_scaffold_17440060370.1
HimpHimp2_scaffold_2610102890.1 handroanthus_impetiginosus HimpHimp2_scaffold_2610102890.1
HimpHimp2_scaffold_2610102910.1 handroanthus_impetiginosus HimpHimp2_scaffold_2610102910.1
HimpHimp2_scaffold_55240209420.1 handroanthus_impetiginosus HimpHimp2_scaffold_55240209420.1
Haplomitrium10671540044370 haplomitrium Haplomitrium10671540044370
Haplomitrium9200850246710 haplomitrium Haplomitrium9200850246710