PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
gossypium_sturtianum_Gstu09G021410 gossypium_sturtianum gossypium_sturtianum_Gstu09G021410
gossypium_sturtianum_Gstu12G000590 gossypium_sturtianum gossypium_sturtianum_Gstu12G000590
gossypium_sturtianum_Gstu12G010260 gossypium_sturtianum gossypium_sturtianum_Gstu12G010260
gossypium_sturtianum_Gstu12G013460 gossypium_sturtianum gossypium_sturtianum_Gstu12G013460
gossypium_sturtianum_Gstu12G023680 gossypium_sturtianum gossypium_sturtianum_Gstu12G023680
gossypium_sturtianum_Gstu12G024910 gossypium_sturtianum gossypium_sturtianum_Gstu12G024910
GtomA01G0017280.1 gossypium_tomentosum GtomA01G0017280.1
GtomA01G0018420.1 gossypium_tomentosum GtomA01G0018420.1
GtomA03G0013880.1 gossypium_tomentosum GtomA03G0013880.1
GtomA05G0027930.1 gossypium_tomentosum GtomA05G0027930.1
GtomA09G0020150.1 gossypium_tomentosum GtomA09G0020150.1
GtomA12G0009790.1 gossypium_tomentosum GtomA12G0009790.1
GtomA12G0017740.1 gossypium_tomentosum GtomA12G0017740.1
GtomA12G0030870.1 gossypium_tomentosum GtomA12G0030870.1
GtomD01G0017740.1 gossypium_tomentosum GtomD01G0017740.1
GtomD01G0017740.2 gossypium_tomentosum GtomD01G0017740.2
GtomD01G0019100.1 gossypium_tomentosum GtomD01G0019100.1
GtomD02G0017580.1 gossypium_tomentosum GtomD02G0017580.1
GtomD05G0028220.1 gossypium_tomentosum GtomD05G0028220.1
GtomD05G0028270.1 gossypium_tomentosum GtomD05G0028270.1
GtomD09G0020120.1 gossypium_tomentosum GtomD09G0020120.1
GtomD12G0009440.1 gossypium_tomentosum GtomD12G0009440.1
GtomD12G0018490.1 gossypium_tomentosum GtomD12G0018490.1
GtomD12G0031860.1 gossypium_tomentosum GtomD12G0031860.1
Gossypium-turneri-TURN-v1.0.a2-publish_TURN.01g009630.m01.polypeptide gossypium_turneri Gossypium-turneri-TURN-v1.0.a2-publish_TURN.01g009630.m01.polypeptide
Gossypium-turneri-TURN-v1.0.a2-publish_TURN.01g011050.m01.polypeptide gossypium_turneri Gossypium-turneri-TURN-v1.0.a2-publish_TURN.01g011050.m01.polypeptide
Gossypium-turneri-TURN-v1.0.a2-publish_TURN.02g343330.m01.polypeptide gossypium_turneri Gossypium-turneri-TURN-v1.0.a2-publish_TURN.02g343330.m01.polypeptide
Gossypium-turneri-TURN-v1.0.a2-publish_TURN.02g352440.m01.polypeptide gossypium_turneri Gossypium-turneri-TURN-v1.0.a2-publish_TURN.02g352440.m01.polypeptide
Gossypium-turneri-TURN-v1.0.a2-publish_TURN.02g365430.m01.polypeptide gossypium_turneri Gossypium-turneri-TURN-v1.0.a2-publish_TURN.02g365430.m01.polypeptide
Gossypium-turneri-TURN-v1.0.a2-publish_TURN.03g063090.m01.polypeptide gossypium_turneri Gossypium-turneri-TURN-v1.0.a2-publish_TURN.03g063090.m01.polypeptide