PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
KAH0465466.1 dendrobium_chrysotoxum KAH0465466.1
KAI0493526.1 dendrobium_nobile KAI0493526.1
genome_Dca34939.1 dianthus_caryophyllus genome_Dca34939.1
genome_Dca5748.1 dianthus_caryophyllus genome_Dca5748.1
Dchi1307910041950 dicranoloma_chilense Dchi1307910041950
Dchi1421880062450 dicranoloma_chilense Dchi1421880062450
Dchi1487420068690 dicranoloma_chilense Dchi1487420068690
DICful3717550073950 dicranum_fulvum DICful3717550073950
DICful4280460226880 dicranum_fulvum DICful4280460226880
digitaria_exilis_Dexi2A01G0011050.1 digitaria_exilis digitaria_exilis_Dexi2A01G0011050.1
digitaria_exilis_Dexi2B01G0010390.1 digitaria_exilis digitaria_exilis_Dexi2B01G0010390.1
digitaria_exilis_Dexi3A01G0007440.1 digitaria_exilis digitaria_exilis_Dexi3A01G0007440.1
digitaria_exilis_Dexi3B01G0007370.1 digitaria_exilis digitaria_exilis_Dexi3B01G0007370.1
digitaria_exilis_Dexi3B01G0019790.1 digitaria_exilis digitaria_exilis_Dexi3B01G0019790.1
digitaria_exilis_Dexi6A01G0003390.1 digitaria_exilis digitaria_exilis_Dexi6A01G0003390.1
digitaria_exilis_Dexi6B01G0003200.1 digitaria_exilis digitaria_exilis_Dexi6B01G0003200.1
dillenia_turbinata_DITU_004791-RA dillenia_turbinata dillenia_turbinata_DITU_004791-RA
dillenia_turbinata_DITU_008847-RA dillenia_turbinata dillenia_turbinata_DITU_008847-RA
dillenia_turbinata_DITU_008848-RA dillenia_turbinata dillenia_turbinata_DITU_008848-RA
dillenia_turbinata_DITU_008849-RA dillenia_turbinata dillenia_turbinata_DITU_008849-RA
dillenia_turbinata_DITU_015872-RA dillenia_turbinata dillenia_turbinata_DITU_015872-RA
dillenia_turbinata_DITU_016434-RA dillenia_turbinata dillenia_turbinata_DITU_016434-RA
dillenia_turbinata_DITU_018232-RA dillenia_turbinata dillenia_turbinata_DITU_018232-RA
dillenia_turbinata_DITU_019010-RA dillenia_turbinata dillenia_turbinata_DITU_019010-RA
Dlonscaffold3940225350 dimocarpus_longan Dlonscaffold3940225350
diospyros_kaki_evm.model.contig4170.45 diospyros_kaki diospyros_kaki_evm.model.contig4170.45
diospyros_kaki_evm.model.contig4184.100 diospyros_kaki diospyros_kaki_evm.model.contig4184.100
diospyros_kaki_evm.model.contig4241.213 diospyros_kaki diospyros_kaki_evm.model.contig4241.213
diospyros_kaki_evm.model.contig4289.127 diospyros_kaki diospyros_kaki_evm.model.contig4289.127
diospyros_kaki_evm.model.contig4310.3 diospyros_kaki diospyros_kaki_evm.model.contig4310.3