PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
euphorbia_peplus_WCJ39557.1 euphorbia_peplus euphorbia_peplus_WCJ39557.1
Esalscaffold_120056850.1 eutrema_salsugineum Esalscaffold_120056850.1
Esalscaffold_160099860.1 eutrema_salsugineum Esalscaffold_160099860.1
fagopyrum_esculentum_FesPL4_r1.1_Chr2.g102730.1 fagopyrum_esculentum fagopyrum_esculentum_FesPL4_r1.1_Chr2.g102730.1
fagopyrum_esculentum_FesPL4_r1.1_Chr8.g202050.1 fagopyrum_esculentum fagopyrum_esculentum_FesPL4_r1.1_Chr8.g202050.1
FtPinG0006172400.01.T01 fagopyrum_tataricum FtPinG0006172400.01.T01
FtPinG0008027800.01.T01 fagopyrum_tataricum FtPinG0008027800.01.T01
Falbscaffold2_cov1850139920 faidherbia_albida Falbscaffold2_cov1850139920
Falbscaffold899_cov1910272900 faidherbia_albida Falbscaffold899_cov1910272900
Fjavscaffold_20092100 fissidens_javanicus Fjavscaffold_20092100
Fjavscaffold_20092110 fissidens_javanicus Fjavscaffold_20092110
Fjavscaffold_30150170 fissidens_javanicus Fjavscaffold_30150170
Fjavscaffold_70234470 fissidens_javanicus Fjavscaffold_70234470
Fontinalis1842380000490 fontinalis Fontinalis1842380000490
Fontinalis2690680030240 fontinalis Fontinalis2690680030240
Fontinalis2690680030250 fontinalis Fontinalis2690680030250
Fontinalis2740320049700 fontinalis Fontinalis2740320049700
Fant1786650102230.1 fontinalis_antipyretica Fant1786650102230.1
Fant1803620136460.1 fontinalis_antipyretica Fant1803620136460.1
Fsul1842380000490 fontinalis_sullivantii Fsul1842380000490
Fsul2690680030240 fontinalis_sullivantii Fsul2690680030240
Fsul2690680030250 fontinalis_sullivantii Fsul2690680030250
Fsul2740320049700 fontinalis_sullivantii Fsul2740320049700
fortunella_hindsii_sjg198030.1 fortunella_hindsii fortunella_hindsii_sjg198030.1
fortunella_hindsii_sjg291090.1 fortunella_hindsii fortunella_hindsii_sjg291090.1
Fossombronia10350009540 fossombronia Fossombronia10350009540
Fossombronia2070130680 fossombronia Fossombronia2070130680
Fossombronia6930269770 fossombronia Fossombronia6930269770
Fossombronia712160276120 fossombronia Fossombronia712160276120
Fossombronia750289130 fossombronia Fossombronia750289130