PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
fragaria_x_ananassa_maker-Fvb2-1-snap-gene-115.36-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb2-1-snap-gene-115.36-mRNA-1
fragaria_x_ananassa_maker-Fvb2-4-augustus-gene-155.41-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb2-4-augustus-gene-155.41-mRNA-1
FexcContig2470123050.1 fraxinus_excelsior FexcContig2470123050.1
FexcContig4150218280.1 fraxinus_excelsior FexcContig4150218280.1
FexcContig4150218280.2 fraxinus_excelsior FexcContig4150218280.2
fraxinus_pennsylvanica_Fp_g25346 fraxinus_pennsylvanica fraxinus_pennsylvanica_Fp_g25346
fraxinus_pennsylvanica_Fp_g41093 fraxinus_pennsylvanica fraxinus_pennsylvanica_Fp_g41093
Fmon4050250109310 frullania_moniliata Fmon4050250109310
Fhygscaffold_210201780 funaria_hygrometrica Fhygscaffold_210201780
Fhygscaffold_210201790 funaria_hygrometrica Fhygscaffold_210201790
Fhygscaffold_210201810 funaria_hygrometrica Fhygscaffold_210201810
Fhygscaffold_210201820 funaria_hygrometrica Fhygscaffold_210201820
Fhygscaffold_210201840 funaria_hygrometrica Fhygscaffold_210201840
Fhygscaffold_210201850 funaria_hygrometrica Fhygscaffold_210201850
Fhygscaffold_210201860 funaria_hygrometrica Fhygscaffold_210201860
Fhygscaffold_210201880 funaria_hygrometrica Fhygscaffold_210201880
Fhygscaffold_210201890 funaria_hygrometrica Fhygscaffold_210201890
Fhygscaffold_210201900 funaria_hygrometrica Fhygscaffold_210201900
Gtri01G0022360 gilleni_trifoliata Gtri01G0022360
Gtri05G0007740 gilleni_trifoliata Gtri05G0007740
Gt00023837 gillenia_trifoliata Gt00023837
Gt00032474 gillenia_trifoliata Gt00032474
Gbil05G0007310.1 ginkgo_biloba Gbil05G0007310.1
Gbil05G0007330.1 ginkgo_biloba Gbil05G0007330.1
Gbil05G0007450.1 ginkgo_biloba Gbil05G0007450.1
Gbil05G0007460.1 ginkgo_biloba Gbil05G0007460.1
Gbil05G0007480.1 ginkgo_biloba Gbil05G0007480.1
Gbil05G0007490.1 ginkgo_biloba Gbil05G0007490.1
Gbil05G0007530.1 ginkgo_biloba Gbil05G0007530.1
Gbilctg908220003370.1 ginkgo_biloba Gbilctg908220003370.1