PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
HhamSuperscaffold150188820 hibiscus_hamabo HhamSuperscaffold150188820
HhamSuperscaffold290525060 hibiscus_hamabo HhamSuperscaffold290525060
HhamSuperscaffold30582540 hibiscus_hamabo HhamSuperscaffold30582540
HhamSuperscaffold380716300 hibiscus_hamabo HhamSuperscaffold380716300
HhamSuperscaffold40761770 hibiscus_hamabo HhamSuperscaffold40761770
HhamSuperscaffold50918460 hibiscus_hamabo HhamSuperscaffold50918460
hippophae_rhamnoides_Hiprha1gene02762 hippophae_rhamnoides hippophae_rhamnoides_Hiprha1gene02762
hippophae_rhamnoides_Hiprha1gene05193 hippophae_rhamnoides hippophae_rhamnoides_Hiprha1gene05193
hippophae_rhamnoides_Hiprha1gene23827 hippophae_rhamnoides hippophae_rhamnoides_Hiprha1gene23827
hirschfeldia_incana_HINC_NIJ_V1_G0017750.1 hirschfeldia_incana hirschfeldia_incana_HINC_NIJ_V1_G0017750.1
hirschfeldia_incana_HINC_NIJ_V1_G0017760.1 hirschfeldia_incana hirschfeldia_incana_HINC_NIJ_V1_G0017760.1
hirschfeldia_incana_HINC_NIJ_V1_G0017770.1 hirschfeldia_incana hirschfeldia_incana_HINC_NIJ_V1_G0017770.1
hirschfeldia_incana_HINC_NIJ_V1_G0106980.1 hirschfeldia_incana hirschfeldia_incana_HINC_NIJ_V1_G0106980.1
hirschfeldia_incana_HINC_NIJ_V1_G0106990.1 hirschfeldia_incana hirschfeldia_incana_HINC_NIJ_V1_G0106990.1
hirschfeldia_incana_HINC_NIJ_V1_G0236510.1 hirschfeldia_incana hirschfeldia_incana_HINC_NIJ_V1_G0236510.1
hirschfeldia_incana_HINC_NIJ_V1_G0280920.1 hirschfeldia_incana hirschfeldia_incana_HINC_NIJ_V1_G0280920.1
hirschfeldia_incana_HINC_NIJ_V1_G0321730.1 hirschfeldia_incana hirschfeldia_incana_HINC_NIJ_V1_G0321730.1
Hsca1250014260 homaliodendron_scalpellifolium Hsca1250014260
Hsca1610040082520 homaliodendron_scalpellifolium Hsca1610040082520
Hsca1610040082530 homaliodendron_scalpellifolium Hsca1610040082530
Hsca1666550227330 homaliodendron_scalpellifolium Hsca1666550227330
Hsca3020267840 homaliodendron_scalpellifolium Hsca3020267840
hordeum_marinum_GWHPBJBH002460 hordeum_marinum hordeum_marinum_GWHPBJBH002460
hordeum_marinum_GWHPBJBH002930 hordeum_marinum hordeum_marinum_GWHPBJBH002930
hordeum_marinum_GWHPBJBH017835 hordeum_marinum hordeum_marinum_GWHPBJBH017835
hordeum_marinum_GWHPBJBH024181 hordeum_marinum hordeum_marinum_GWHPBJBH024181
hordeum_marinum_GWHPBJBH033589 hordeum_marinum hordeum_marinum_GWHPBJBH033589
hordeum_marinum_GWHPBJBH049255 hordeum_marinum hordeum_marinum_GWHPBJBH049255
hordeum_marinum_GWHPBJBH061566 hordeum_marinum hordeum_marinum_GWHPBJBH061566
hordeum_marinum_GWHPBJBH063296 hordeum_marinum hordeum_marinum_GWHPBJBH063296