PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
GangGan004304550261000.1 guadua_angustifolia GangGan004304550261000.1
gynandropsis_gynandra_Gyn_10X_HIC_v5_00014276.mRNA1 gynandropsis_gynandra gynandropsis_gynandra_Gyn_10X_HIC_v5_00014276.mRNA1
gynandropsis_gynandra_Gyn_10X_HIC_v5_00026074.mRNA1 gynandropsis_gynandra gynandropsis_gynandra_Gyn_10X_HIC_v5_00026074.mRNA1
gynandropsis_gynandra_Gyn_10X_HIC_v5_00029348.mRNA1 gynandropsis_gynandra gynandropsis_gynandra_Gyn_10X_HIC_v5_00029348.mRNA1
gynandropsis_gynandra_Gyn_10X_HIC_v5_00029351.mRNA1 gynandropsis_gynandra gynandropsis_gynandra_Gyn_10X_HIC_v5_00029351.mRNA1
gypsophila_paniculata_Gpan06g00747.m1 gypsophila_paniculata gypsophila_paniculata_Gpan06g00747.m1
gypsophila_paniculata_Gpan07g00458.m1 gypsophila_paniculata gypsophila_paniculata_Gpan07g00458.m1
haloxylon_ammodendron_SS08687.t1 haloxylon_ammodendron haloxylon_ammodendron_SS08687.t1
haloxylon_ammodendron_SS10085.t1 haloxylon_ammodendron haloxylon_ammodendron_SS10085.t1
haloxylon_ammodendron_SS11811.t1 haloxylon_ammodendron haloxylon_ammodendron_SS11811.t1
haloxylon_ammodendron_SS11830.t1 haloxylon_ammodendron haloxylon_ammodendron_SS11830.t1
haloxylon_ammodendron_SS11831.t1 haloxylon_ammodendron haloxylon_ammodendron_SS11831.t1
haloxylon_ammodendron_SS21853.t1 haloxylon_ammodendron haloxylon_ammodendron_SS21853.t1
HimpHimp2_scaffold_26490104150.1 handroanthus_impetiginosus HimpHimp2_scaffold_26490104150.1
HimpHimp2_scaffold_51490196640.1 handroanthus_impetiginosus HimpHimp2_scaffold_51490196640.1
Haplomitrium10565360034840 haplomitrium Haplomitrium10565360034840
Hcilscaffold_40114830 hedwigia_ciliata Hcilscaffold_40114830
Hcilscaffold_40114840 hedwigia_ciliata Hcilscaffold_40114840
Hcilscaffold_70157190 hedwigia_ciliata Hcilscaffold_70157190
Hann01G0020640.1 helianthus_annuus Hann01G0020640.1
Hann13G0009980.1 helianthus_annuus Hann13G0009980.1
Hann17G0001880.1 helianthus_annuus Hann17G0001880.1
Hann17G0001890.1 helianthus_annuus Hann17G0001890.1
Hann17G0001900.1 helianthus_annuus Hann17G0001900.1
heliophila_variabilis_HV03G013650 heliophila_variabilis heliophila_variabilis_HV03G013650
heliophila_variabilis_HV05G011030 heliophila_variabilis heliophila_variabilis_HV05G011030
heliophila_variabilis_HV11G018260 heliophila_variabilis heliophila_variabilis_HV11G018260
heliophila_variabilis_HV11G018270 heliophila_variabilis heliophila_variabilis_HV11G018270
HhamSuperscaffold10028280 hibiscus_hamabo HhamSuperscaffold10028280
HhamSuperscaffold140164480 hibiscus_hamabo HhamSuperscaffold140164480