TDC

Atlas summary family TDC.

Lineage Coverage

Detected in 29 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Miscanthus lutarioriparius

Chrysanthemum seticuspe

Zoysia matrella

Aegilops tauschii

Related Modules

Alkaloid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
GmusD07G0017610.2	gossypium_mustelinum	GmusD07G0017610.2
Grai01G0018250.1	gossypium_raimondii	Grai01G0018250.1
Grai01G0018250.2	gossypium_raimondii	Grai01G0018250.2
Grai01G0018250.3	gossypium_raimondii	Grai01G0018250.3
Grai01G0018250.4	gossypium_raimondii	Grai01G0018250.4
Grai02G0001690.1	gossypium_raimondii	Grai02G0001690.1
gossypium_rotundifolium_Grot_01G028280.1	gossypium_rotundifolium	gossypium_rotundifolium_Grot_01G028280.1
gossypium_stocksii_Gsto_01G001670.1	gossypium_stocksii	gossypium_stocksii_Gsto_01G001670.1
gossypium_stocksii_Gsto_07G018590.3	gossypium_stocksii	gossypium_stocksii_Gsto_07G018590.3
gossypium_sturtianum_Gstu01G027120	gossypium_sturtianum	gossypium_sturtianum_Gstu01G027120
gossypium_sturtianum_Gstu07G018880	gossypium_sturtianum	gossypium_sturtianum_Gstu07G018880
GtomA01G0001910.1	gossypium_tomentosum	GtomA01G0001910.1
GtomA01G0001920.1	gossypium_tomentosum	GtomA01G0001920.1
GtomA01G0001930.1	gossypium_tomentosum	GtomA01G0001930.1
GtomA01G0001940.1	gossypium_tomentosum	GtomA01G0001940.1
GtomA01G0001960.1	gossypium_tomentosum	GtomA01G0001960.1
GtomA07G0017770.1	gossypium_tomentosum	GtomA07G0017770.1
GtomA07G0017770.2	gossypium_tomentosum	GtomA07G0017770.2
GtomA07G0017770.3	gossypium_tomentosum	GtomA07G0017770.3
GtomA07G0017770.4	gossypium_tomentosum	GtomA07G0017770.4
GtomA07G0017770.5	gossypium_tomentosum	GtomA07G0017770.5
GtomA07G0017770.6	gossypium_tomentosum	GtomA07G0017770.6
GtomD01G0001840.1	gossypium_tomentosum	GtomD01G0001840.1
GtomD07G0018150.1	gossypium_tomentosum	GtomD07G0018150.1
Gossypium-turneri-TURN-v1.0.a2-publish_TURN.01g026610.m01.polypeptide	gossypium_turneri	Gossypium-turneri-TURN-v1.0.a2-publish_TURN.01g026610.m01.polypeptide
Gossypium-turneri-TURN-v1.0.a2-publish_TURN.07g186940.m01.polypeptide	gossypium_turneri	Gossypium-turneri-TURN-v1.0.a2-publish_TURN.07g186940.m01.polypeptide
GobtHiC_scaffold_30160680	grimmia_obtusifolia	GobtHiC_scaffold_30160680
GobtHiC_scaffold_70238920	grimmia_obtusifolia	GobtHiC_scaffold_70238920
GobtHiC_scaffold_70238930	grimmia_obtusifolia	GobtHiC_scaffold_70238930
GobtHiC_scaffold_80256640	grimmia_obtusifolia	GobtHiC_scaffold_80256640