PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Mpudscaffold2107_cov1960136100 mimosa_pudica Mpudscaffold2107_cov1960136100
Mpudscaffold227_cov1930148370 mimosa_pudica Mpudscaffold227_cov1930148370
Mpudscaffold248_cov1930161330 mimosa_pudica Mpudscaffold248_cov1930161330
Mpudscaffold3484_cov2170200510 mimosa_pudica Mpudscaffold3484_cov2170200510
Mpudscaffold5062_cov2090248810 mimosa_pudica Mpudscaffold5062_cov2090248810
Mpudscaffold6483_cov2090279030 mimosa_pudica Mpudscaffold6483_cov2090279030
Mgutscaffold_20122840.1 mimulus_guttatus Mgutscaffold_20122840.1
Mgutscaffold_30143740.1 mimulus_guttatus Mgutscaffold_30143740.1
Mgutscaffold_40152750.1 mimulus_guttatus Mgutscaffold_40152750.1
Mgutscaffold_40159880.1 mimulus_guttatus Mgutscaffold_40159880.1
Mgutscaffold_50183830.1 mimulus_guttatus Mgutscaffold_50183830.1
Mlutescaffold_13950074610.1 mimulus_luteus Mlutescaffold_13950074610.1
Mlutescaffold_15430096490.1 mimulus_luteus Mlutescaffold_15430096490.1
Mlutescaffold_3160222750.1 mimulus_luteus Mlutescaffold_3160222750.1
Mlutescaffold_3700251450.1 mimulus_luteus Mlutescaffold_3700251450.1
Mlutescaffold_5480331880.1 mimulus_luteus Mlutescaffold_5480331880.1
Mluta06G0001120.1 miscanthus_lutarioriparius Mluta06G0001120.1
Mluta06G0001330.1 miscanthus_lutarioriparius Mluta06G0001330.1
Mluta07G0017580.1 miscanthus_lutarioriparius Mluta07G0017580.1
Mluta07G0036050.1 miscanthus_lutarioriparius Mluta07G0036050.1
Mluta07G0036140.1 miscanthus_lutarioriparius Mluta07G0036140.1
Mluta07G0036150.1 miscanthus_lutarioriparius Mluta07G0036150.1
Mluta07G0036160.1 miscanthus_lutarioriparius Mluta07G0036160.1
Mluta07G0036170.1 miscanthus_lutarioriparius Mluta07G0036170.1
Mluta07G0036180.1 miscanthus_lutarioriparius Mluta07G0036180.1
Mluta07G0036190.1 miscanthus_lutarioriparius Mluta07G0036190.1
Mluta08G0018510.1 miscanthus_lutarioriparius Mluta08G0018510.1
Mluta09G0005560.1 miscanthus_lutarioriparius Mluta09G0005560.1
Mluta13G0018140.1 miscanthus_lutarioriparius Mluta13G0018140.1
Mluta13G0018150.1 miscanthus_lutarioriparius Mluta13G0018150.1