PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
MpygGWHANWB000000010009460.1 megadenia_pygmaea MpygGWHANWB000000010009460.1
MpygGWHANWB000000010018210.1 megadenia_pygmaea MpygGWHANWB000000010018210.1
melaleuca_alternifolia_scf7180000036643_gene_99 melaleuca_alternifolia melaleuca_alternifolia_scf7180000036643_gene_99
melaleuca_alternifolia_scf7180000037305_gene_98 melaleuca_alternifolia melaleuca_alternifolia_scf7180000037305_gene_98
Mlonscaffold_8_length_368420820184050.1 mentha_longifolia Mlonscaffold_8_length_368420820184050.1
mesembryanthemum_crystallinum_Mc02G01182 mesembryanthemum_crystallinum mesembryanthemum_crystallinum_Mc02G01182
mesembryanthemum_crystallinum_Mc04G01323 mesembryanthemum_crystallinum mesembryanthemum_crystallinum_Mc04G01323
mesembryanthemum_crystallinum_Mc06G00077 mesembryanthemum_crystallinum mesembryanthemum_crystallinum_Mc06G00077
mesembryanthemum_crystallinum_Mc08G01828 mesembryanthemum_crystallinum mesembryanthemum_crystallinum_Mc08G01828
mesembryanthemum_crystallinum_Mc08G01829 mesembryanthemum_crystallinum mesembryanthemum_crystallinum_Mc08G01829
Mesp4383590047930 mesoptychia_sp Mesp4383590047930
Mesp44320051370 mesoptychia_sp Mesp44320051370
Mesp6229240227620 mesoptychia_sp Mesp6229240227620
Mesp6252220242640 mesoptychia_sp Mesp6252220242640
MendS2130040590 mesotaenium_endlicherianum MendS2130040590
MendS3360065630 mesotaenium_endlicherianum MendS3360065630
MendS750101230 mesotaenium_endlicherianum MendS750101230
mesua_ferrea_Mesfe3S20617_MESFER mesua_ferrea mesua_ferrea_Mesfe3S20617_MESFER
mesua_ferrea_Mesfe4S35319_MESFER mesua_ferrea mesua_ferrea_Mesfe4S35319_MESFER
mesua_ferrea_Mesfe4S35320_MESFER mesua_ferrea mesua_ferrea_Mesfe4S35320_MESFER
Mhamcontig_1310045580 metzgeria_hamata Mhamcontig_1310045580
Mhamcontig_1550077670 metzgeria_hamata Mhamcontig_1550077670
Mhamcontig_1940137290 metzgeria_hamata Mhamcontig_1940137290
Mhamcontig_390209940 metzgeria_hamata Mhamcontig_390209940
Mcom05G0003190.1 micromonas_commoda Mcom05G0003190.1
Mpusscaffold_30064860.1 micromonas_pusilla Mpusscaffold_30064860.1
58496|PACid:27395326 micromonas_sp_rcc299 58496|PACid:27395326
Mpudscaffold10218_cov2060003090 mimosa_pudica Mpudscaffold10218_cov2060003090
Mpudscaffold110_cov2210015600 mimosa_pudica Mpudscaffold110_cov2210015600
Mpudscaffold1675_cov1900108240 mimosa_pudica Mpudscaffold1675_cov1900108240