Micromonas sp.RCC299 (micromonas_sp_rcc299)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 38.2% Alkaloid pathway 26.97% Phenylpropanoid pathway 14.61% Steroid pathway 14.61% Rosmarinic acid pathway 3.37% Flavonoid pathway 2.25%

Family Distribution

89 Candidate Genes

NMT 8.0% BAHD 6.15% 4CL 5.54% IFR 5.23% CYP71 5.23% C4H 3.38% POD 3.38% C3'H/CYP98A 3.38%

Other Families 59.69%

More Families (71)

TRI/TRII 10 3.08% IFS 10 3.08% H6H 8 2.46% STR 8 2.46% CNMT 8 2.46% SMT1/SMT2/SMT3 7 2.15% F3H 6 1.85% ANR 6 1.85% CSE 6 1.85% CYP76 6 1.85% PMT 5 1.54% T3O 5 1.54% COR 5 1.54% CAS 5 1.54% DWF4/CYP90B1 5 1.54% GS 4 1.23% SQS/FDFT1 4 1.23% G8O/G8H 3 0.92% CYP80B1 3 0.92% SLS 3 0.92% DFR 3 0.92% CCR 3 0.92% RAS 3 0.92% CPR 3 0.92% CYP90D1 3 0.92% CPD/CYP90A1 3 0.92% FPPS 3 0.92% GGPPS 3 0.92% AACT 3 0.92% MVK 3 0.92% PYKS 2 0.62% GES 2 0.62% UFGT 2 0.62% FNS 2 0.62% DET2 2 0.62% MCT/IspD 2 0.62% MPO 1 0.31% 8HGO 1 0.31% ODC 1 0.31% TDC 1 0.31% T16H 1 0.31% NCS 1 0.31% 7DLH 1 0.31% F3'5'H/CYP75A 1 0.31% CHS 1 0.31% ANS/LDOX 1 0.31% FLS 1 0.31% F3'H/CYP75B 1 0.31% COMT 1 0.31% F5H/CYP84A 1 0.31% CAD 1 0.31% CCoAOMT 1 0.31% TAT 1 0.31% HPPR 1 0.31% FK 1 0.31% DWF5 1 0.31% BR6OX2/CYP85A2 1 0.31% SQE 1 0.31% CYP51G1 1 0.31% CPI1 1 0.31% BR6OX1/CYP85A1 1 0.31% SMO1/SMO2 1 0.31% DXS 1 0.31% MVD 1 0.31% DXR 1 0.31% CMK/IspE 1 0.31% MDS/IspF 1 0.31% IDI 1 0.31% UGT 1 0.31% HDS/IspG 1 0.31% HDR/IspH 1 0.31%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	34	12	BAHD (13)	View species results
Alkaloid pathway	24	8	NMT (7)	View species results
Phenylpropanoid pathway	13	4	POD (10)	View species results
Steroid pathway	13	8	CAS (4)	View species results
Rosmarinic acid pathway	3	2	CPR (2)	View species results
Flavonoid pathway	2	1	IFR (2)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	20	88	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, SLS, T16H, T3O
BAHD/acyltransferase	2	23	BAHD, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Gene	Pathway	Family	Confidence	Status
88940\|PACid:27397087	Alkaloid	7DLH	medium	borderline
56654\|PACid:27398570	Alkaloid	8HGO	medium	borderline
57838\|PACid:27400258	Alkaloid	CNMT	low	borderline
58631\|PACid:27395774	Alkaloid	CNMT	low	borderline
58727\|PACid:27395669	Alkaloid	CNMT	low	borderline
59570\|PACid:27401928	Alkaloid	CNMT	low	borderline
61477\|PACid:27401490	Alkaloid	CNMT	medium	borderline
70635\|PACid:27398136	Alkaloid	CNMT	low	borderline
75700\|PACid:27404757	Alkaloid	CNMT	low	borderline
77481\|PACid:27399137	Alkaloid	CNMT	low	borderline
78991\|PACid:27396717	Alkaloid	COR	medium	pass
80447\|PACid:27400513	Alkaloid	COR	medium	pass
84021\|PACid:27403232	Alkaloid	COR	medium	pass
86329\|PACid:27404882	Alkaloid	COR	medium	pass
98293\|PACid:27403843	Alkaloid	COR	medium	pass
52494\|PACid:27399688	Alkaloid	CYP80B1	low	borderline
57505\|PACid:27400663	Alkaloid	CYP80B1	medium	borderline
71821\|PACid:27402483	Alkaloid	CYP80B1	low	borderline
114066\|PACid:27399327	Alkaloid	G8O/G8H	low	borderline
55968\|PACid:27396953	Alkaloid	G8O/G8H	medium	borderline
57317\|PACid:27398378	Alkaloid	G8O/G8H	medium	borderline
109001\|PACid:27397265	Alkaloid	GES	low	borderline
55537\|PACid:27399278	Alkaloid	GES	low	borderline
102719\|PACid:27397560	Alkaloid	GS	low	borderline
57654\|PACid:27400361	Alkaloid	GS	low	borderline
66596\|PACid:27398506	Alkaloid	GS	low	borderline
69704\|PACid:27400751	Alkaloid	GS	high	pass
101662\|PACid:27404335	Alkaloid	H6H	low	borderline
56736\|PACid:27398126	Alkaloid	H6H	low	borderline
56773\|PACid:27398455	Alkaloid	H6H	low	borderline
59138\|PACid:27402475	Alkaloid	H6H	low	borderline
59237\|PACid:27402320	Alkaloid	H6H	low	borderline
61394\|PACid:27401418	Alkaloid	H6H	low	borderline
64932\|PACid:27397058	Alkaloid	H6H	low	borderline
79568\|PACid:27398681	Alkaloid	H6H	low	borderline
56524\|PACid:27396801	Alkaloid	MPO	high	pass
84039\|PACid:27403527	Alkaloid	NCS	low	borderline
100066\|PACid:27400028	Alkaloid	NMT	low	borderline
105736\|PACid:27402110	Alkaloid	NMT	low	borderline
108349\|PACid:27395757	Alkaloid	NMT	medium	pass
109100\|PACid:27405171	Alkaloid	NMT	medium	pass
50312\|PACid:27395712	Alkaloid	NMT	low	borderline
55677\|PACid:27396233	Alkaloid	NMT	low	borderline
56245\|PACid:27396434	Alkaloid	NMT	low	borderline
56349\|PACid:27396811	Alkaloid	NMT	medium	borderline
57801\|PACid:27400091	Alkaloid	NMT	low	borderline
58938\|PACid:27395850	Alkaloid	NMT	low	borderline
59038\|PACid:27401942	Alkaloid	NMT	medium	borderline
60550\|PACid:27403086	Alkaloid	NMT	low	borderline
61308\|PACid:27401320	Alkaloid	NMT	medium	borderline