Micromonas sp.RCC299 (micromonas_sp_rcc299)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 38.2% Alkaloid pathway 26.97% Phenylpropanoid pathway 14.61% Steroid pathway 14.61% Rosmarinic acid pathway 3.37% Flavonoid pathway 2.25%

Family Distribution

89 Candidate Genes

NMT 8.0% BAHD 6.15% 4CL 5.54% IFR 5.23% CYP71 5.23% C4H 3.38% POD 3.38% C3'H/CYP98A 3.38%

Other Families 59.69%

More Families (71)

TRI/TRII 10 3.08% IFS 10 3.08% H6H 8 2.46% STR 8 2.46% CNMT 8 2.46% SMT1/SMT2/SMT3 7 2.15% F3H 6 1.85% ANR 6 1.85% CSE 6 1.85% CYP76 6 1.85% PMT 5 1.54% T3O 5 1.54% COR 5 1.54% CAS 5 1.54% DWF4/CYP90B1 5 1.54% GS 4 1.23% SQS/FDFT1 4 1.23% G8O/G8H 3 0.92% CYP80B1 3 0.92% SLS 3 0.92% DFR 3 0.92% CCR 3 0.92% RAS 3 0.92% CPR 3 0.92% CYP90D1 3 0.92% CPD/CYP90A1 3 0.92% FPPS 3 0.92% GGPPS 3 0.92% AACT 3 0.92% MVK 3 0.92% PYKS 2 0.62% GES 2 0.62% UFGT 2 0.62% FNS 2 0.62% DET2 2 0.62% MCT/IspD 2 0.62% MPO 1 0.31% 8HGO 1 0.31% ODC 1 0.31% TDC 1 0.31% T16H 1 0.31% NCS 1 0.31% 7DLH 1 0.31% F3'5'H/CYP75A 1 0.31% CHS 1 0.31% ANS/LDOX 1 0.31% FLS 1 0.31% F3'H/CYP75B 1 0.31% COMT 1 0.31% F5H/CYP84A 1 0.31% CAD 1 0.31% CCoAOMT 1 0.31% TAT 1 0.31% HPPR 1 0.31% FK 1 0.31% DWF5 1 0.31% BR6OX2/CYP85A2 1 0.31% SQE 1 0.31% CYP51G1 1 0.31% CPI1 1 0.31% BR6OX1/CYP85A1 1 0.31% SMO1/SMO2 1 0.31% DXS 1 0.31% MVD 1 0.31% DXR 1 0.31% CMK/IspE 1 0.31% MDS/IspF 1 0.31% IDI 1 0.31% UGT 1 0.31% HDS/IspG 1 0.31% HDR/IspH 1 0.31%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	34	12	BAHD (13)	View species results
Alkaloid pathway	24	8	NMT (7)	View species results
Phenylpropanoid pathway	13	4	POD (10)	View species results
Steroid pathway	13	8	CAS (4)	View species results
Rosmarinic acid pathway	3	2	CPR (2)	View species results
Flavonoid pathway	2	1	IFR (2)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	20	88	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, SLS, T16H, T3O
BAHD/acyltransferase	2	23	BAHD, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: NMT

Gene	Pathway	Family	Confidence	Status	Best Target
100066\|PACid:27400028	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
105736\|PACid:27402110	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
108349\|PACid:27395757	Alkaloid	NMT	medium	pass	NMT__00023__sp_O82210_ANM12_ARATH
109100\|PACid:27405171	Alkaloid	NMT	medium	pass	NMT__00023__sp_O82210_ANM12_ARATH
50312\|PACid:27395712	Alkaloid	NMT	low	borderline	NMT__00060__sp_Q9MAT5_ANM10_ARATH
55677\|PACid:27396233	Alkaloid	NMT	low	borderline	NMT__00020__sp_O23372_ATXR3_ARATH
56245\|PACid:27396434	Alkaloid	NMT	low	borderline	NMT__00053__sp_Q9C6B9_PEAM3_ARATH
56349\|PACid:27396811	Alkaloid	NMT	medium	borderline	NMT__00066__sp_Q9SU94_ANM11_ARATH
57801\|PACid:27400091	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
58938\|PACid:27395850	Alkaloid	NMT	low	borderline	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
59038\|PACid:27401942	Alkaloid	NMT	medium	borderline	NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
60550\|PACid:27403086	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
61308\|PACid:27401320	Alkaloid	NMT	medium	borderline	NMT__00001__sp_A0A075D654_ANMT_RAUSE
61711\|PACid:27397664	Alkaloid	NMT	low	borderline	NMT__00020__sp_O23372_ATXR3_ARATH
63548\|PACid:27402703	Alkaloid	NMT	low	borderline	NMT__00025__sp_P93831_CLF_ARATH
64853\|PACid:27397264	Alkaloid	NMT	low	borderline	NMT__00055__sp_Q9FNC7_SUVR2_ARATH
73010\|PACid:27400127	Alkaloid	NMT	medium	pass	NMT__00022__sp_O65312_MEDEA_ARATH
77641\|PACid:27398750	Alkaloid	NMT	medium	pass	NMT__00060__sp_Q9MAT5_ANM10_ARATH
78558\|PACid:27396872	Alkaloid	NMT	medium	pass	NMT__00039__sp_Q84W92_ANM13_ARATH
81638\|PACid:27395415	Alkaloid	NMT	medium	borderline	NMT__00023__sp_O82210_ANM12_ARATH
82306\|PACid:27396002	Alkaloid	NMT	medium	borderline	NMT__00004__sp_A0A1C9U5X7_NMT4_PAPSO
83006\|PACid:27402071	Alkaloid	NMT	low	borderline	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
86035\|PACid:27397558	Alkaloid	NMT	medium	pass	NMT__00041__sp_Q8GWT4_ANM15_ARATH
89128\|PACid:27397056	Alkaloid	NMT	medium	pass	NMT__00032__sp_Q5PP37_ATXR2_ARATH
93596\|PACid:27396199	Alkaloid	NMT	medium	borderline	NMT__00050__sp_Q944H0_PEAM2_ARATH
99875\|PACid:27400202	Alkaloid	NMT	low	borderline	NMT__00060__sp_Q9MAT5_ANM10_ARATH