Micromonas sp.RCC299 (micromonas_sp_rcc299)
Imported from atlas release summary for Micromonas sp.RCC299.
89
Candidate Genes
79
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
89
Candidate Genes
NMT
8.0%
BAHD
6.15%
4CL
5.54%
IFR
5.23%
CYP71
5.23%
C4H
3.38%
POD
3.38%
C3'H/CYP98A
3.38%
Other Families
59.69%
More Families (71)
TRI/TRII
10
3.08%
IFS
10
3.08%
H6H
8
2.46%
STR
8
2.46%
CNMT
8
2.46%
SMT1/SMT2/SMT3
7
2.15%
F3H
6
1.85%
ANR
6
1.85%
CSE
6
1.85%
CYP76
6
1.85%
PMT
5
1.54%
T3O
5
1.54%
COR
5
1.54%
CAS
5
1.54%
DWF4/CYP90B1
5
1.54%
GS
4
1.23%
SQS/FDFT1
4
1.23%
G8O/G8H
3
0.92%
CYP80B1
3
0.92%
SLS
3
0.92%
DFR
3
0.92%
CCR
3
0.92%
RAS
3
0.92%
CPR
3
0.92%
CYP90D1
3
0.92%
CPD/CYP90A1
3
0.92%
FPPS
3
0.92%
GGPPS
3
0.92%
AACT
3
0.92%
MVK
3
0.92%
PYKS
2
0.62%
GES
2
0.62%
UFGT
2
0.62%
FNS
2
0.62%
DET2
2
0.62%
MCT/IspD
2
0.62%
MPO
1
0.31%
8HGO
1
0.31%
ODC
1
0.31%
TDC
1
0.31%
T16H
1
0.31%
NCS
1
0.31%
7DLH
1
0.31%
F3'5'H/CYP75A
1
0.31%
CHS
1
0.31%
ANS/LDOX
1
0.31%
FLS
1
0.31%
F3'H/CYP75B
1
0.31%
COMT
1
0.31%
F5H/CYP84A
1
0.31%
CAD
1
0.31%
CCoAOMT
1
0.31%
TAT
1
0.31%
HPPR
1
0.31%
FK
1
0.31%
DWF5
1
0.31%
BR6OX2/CYP85A2
1
0.31%
SQE
1
0.31%
CYP51G1
1
0.31%
CPI1
1
0.31%
BR6OX1/CYP85A1
1
0.31%
SMO1/SMO2
1
0.31%
DXS
1
0.31%
MVD
1
0.31%
DXR
1
0.31%
CMK/IspE
1
0.31%
MDS/IspF
1
0.31%
IDI
1
0.31%
UGT
1
0.31%
HDS/IspG
1
0.31%
HDR/IspH
1
0.31%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 34 | 12 | BAHD (13) | View species results |
| Alkaloid pathway | 24 | 8 | NMT (7) | View species results |
| Phenylpropanoid pathway | 13 | 4 | POD (10) | View species results |
| Steroid pathway | 13 | 8 | CAS (4) | View species results |
| Rosmarinic acid pathway | 3 | 2 | CPR (2) | View species results |
| Flavonoid pathway | 2 | 1 | IFR (2) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 20 | 88 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, SLS, T16H, T3O |
| BAHD/acyltransferase | 2 | 23 | BAHD, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| 104547|PACid:27397022 | Rosmarinic Acid | 4CL | low | borderline |
| 107347|PACid:27398832 | Rosmarinic Acid | 4CL | low | borderline |
| 108368|PACid:27402436 | Rosmarinic Acid | 4CL | low | borderline |
| 55049|PACid:27398894 | Rosmarinic Acid | 4CL | low | borderline |
| 93685|PACid:27398380 | Rosmarinic Acid | 4CL | low | borderline |
| 97670|PACid:27404495 | Rosmarinic Acid | 4CL | low | borderline |
| 55968|PACid:27396953 | Rosmarinic Acid | C4H | low | borderline |
| 57317|PACid:27398378 | Rosmarinic Acid | C4H | low | borderline |
| 57505|PACid:27400663 | Rosmarinic Acid | C4H | low | borderline |
| 59502|PACid:27402096 | Rosmarinic Acid | C4H | low | borderline |
| 60838|PACid:27403159 | Rosmarinic Acid | C4H | low | borderline |
| 62058|PACid:27397668 | Rosmarinic Acid | C4H | low | borderline |
| 88940|PACid:27397087 | Rosmarinic Acid | C4H | low | borderline |
| 93908|PACid:27400515 | Rosmarinic Acid | C4H | low | borderline |
| 95887|PACid:27403866 | Rosmarinic Acid | C4H | low | borderline |
| 104620|PACid:27397200 | Rosmarinic Acid | CPR | low | borderline |
| 75222|PACid:27399637 | Rosmarinic Acid | CPR | medium | pass |
| 93204|PACid:27399288 | Rosmarinic Acid | CPR | medium | pass |
| 56207|PACid:27396137 | Rosmarinic Acid | HPPR | low | borderline |
| 103231|PACid:27405211 | Rosmarinic Acid | RAS | low | borderline |
| 78493|PACid:27396122 | Rosmarinic Acid | RAS | low | borderline |
| 99842|PACid:27400651 | Rosmarinic Acid | RAS | low | borderline |
| 113229|PACid:27398813 | Rosmarinic Acid | TAT | medium | pass |