TDC

Atlas summary family TDC.

Lineage Coverage

Detected in 29 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Miscanthus lutarioriparius

Chrysanthemum seticuspe

Zoysia matrella

Aegilops tauschii

Related Modules

Alkaloid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
Nnucmegascaffold_30143690.1	nelumbo_nucifera	Nnucmegascaffold_30143690.1
Nnucmegascaffold_60212350.1	nelumbo_nucifera	Nnucmegascaffold_60212350.1
Nnucmegascaffold_70230750.1	nelumbo_nucifera	Nnucmegascaffold_70230750.1
Nnucmegascaffold_70231810.1	nelumbo_nucifera	Nnucmegascaffold_70231810.1
neolamarckia_cadamba_evm.model.Contig139.55	neolamarckia_cadamba	neolamarckia_cadamba_evm.model.Contig139.55
neolamarckia_cadamba_evm.model.Contig171.132	neolamarckia_cadamba	neolamarckia_cadamba_evm.model.Contig171.132
neolamarckia_cadamba_evm.model.Contig826.25	neolamarckia_cadamba	neolamarckia_cadamba_evm.model.Contig826.25
nepenthes_mirabilis_FUN_001537-T1	nepenthes_mirabilis	nepenthes_mirabilis_FUN_001537-T1
nepenthes_mirabilis_FUN_008312-T1	nepenthes_mirabilis	nepenthes_mirabilis_FUN_008312-T1
nepenthes_mirabilis_FUN_031695-T1	nepenthes_mirabilis	nepenthes_mirabilis_FUN_031695-T1
nepeta_cataria_g23200.t1	nepeta_cataria	nepeta_cataria_g23200.t1
nepeta_cataria_g24648.t1	nepeta_cataria	nepeta_cataria_g24648.t1
nepeta_mussinii_g8543.t1	nepeta_mussinii	nepeta_mussinii_g8543.t1
nephelium_lappaceum_GWHPBECQ008835	nephelium_lappaceum	nephelium_lappaceum_GWHPBECQ008835
nephelium_lappaceum_GWHPBECQ008840	nephelium_lappaceum	nephelium_lappaceum_GWHPBECQ008840
nephelium_lappaceum_GWHPBECQ014284	nephelium_lappaceum	nephelium_lappaceum_GWHPBECQ014284
nicotiana_benthamiana_Niben261Chr03g1513005.1	nicotiana_benthamiana	nicotiana_benthamiana_Niben261Chr03g1513005.1
nicotiana_benthamiana_Niben261Chr04g1119007.1	nicotiana_benthamiana	nicotiana_benthamiana_Niben261Chr04g1119007.1
nicotiana_benthamiana_Niben261Chr05g0384015.1	nicotiana_benthamiana	nicotiana_benthamiana_Niben261Chr05g0384015.1
nicotiana_benthamiana_Niben261Chr11g1120007.1	nicotiana_benthamiana	nicotiana_benthamiana_Niben261Chr11g1120007.1
nicotiana_sylvestris_XP_009762726.1	nicotiana_sylvestris	nicotiana_sylvestris_XP_009762726.1
nicotiana_sylvestris_XP_009762728.1	nicotiana_sylvestris	nicotiana_sylvestris_XP_009762728.1
nicotiana_sylvestris_XP_009770265.1	nicotiana_sylvestris	nicotiana_sylvestris_XP_009770265.1
nicotiana_sylvestris_XP_009774334.1	nicotiana_sylvestris	nicotiana_sylvestris_XP_009774334.1
nicotiana_sylvestris_XP_009779195.1	nicotiana_sylvestris	nicotiana_sylvestris_XP_009779195.1
nicotiana_sylvestris_XP_009784234.1	nicotiana_sylvestris	nicotiana_sylvestris_XP_009784234.1
nicotiana_sylvestris_XP_009784235.1	nicotiana_sylvestris	nicotiana_sylvestris_XP_009784235.1
nicotiana_sylvestris_XP_009803987.1	nicotiana_sylvestris	nicotiana_sylvestris_XP_009803987.1
nicotiana_tabacum_Nitab4.5_0000032g0410.1	nicotiana_tabacum	nicotiana_tabacum_Nitab4.5_0000032g0410.1
nicotiana_tabacum_Nitab4.5_0000318g0220.1	nicotiana_tabacum	nicotiana_tabacum_Nitab4.5_0000318g0220.1