TDC

Atlas summary family TDC.

Lineage Coverage

Detected in 29 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Miscanthus lutarioriparius

Chrysanthemum seticuspe

Zoysia matrella

Aegilops tauschii

Related Modules

Alkaloid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
nicotiana_tabacum_Nitab4.5_0000318g0230.1	nicotiana_tabacum	nicotiana_tabacum_Nitab4.5_0000318g0230.1
nicotiana_tabacum_Nitab4.5_0000865g0040.1	nicotiana_tabacum	nicotiana_tabacum_Nitab4.5_0000865g0040.1
nicotiana_tabacum_Nitab4.5_0002809g0070.1	nicotiana_tabacum	nicotiana_tabacum_Nitab4.5_0002809g0070.1
nicotiana_tabacum_Nitab4.5_0002989g0010.1	nicotiana_tabacum	nicotiana_tabacum_Nitab4.5_0002989g0010.1
nicotiana_tabacum_Nitab4.5_0004908g0060.1	nicotiana_tabacum	nicotiana_tabacum_Nitab4.5_0004908g0060.1
nicotiana_tabacum_Nitab4.5_0004957g0010.1	nicotiana_tabacum	nicotiana_tabacum_Nitab4.5_0004957g0010.1
nicotiana_tomentosiformis_XP_009599698.1	nicotiana_tomentosiformis	nicotiana_tomentosiformis_XP_009599698.1
nicotiana_tomentosiformis_XP_009601849.1	nicotiana_tomentosiformis	nicotiana_tomentosiformis_XP_009601849.1
nicotiana_tomentosiformis_XP_009602156.1	nicotiana_tomentosiformis	nicotiana_tomentosiformis_XP_009602156.1
nicotiana_tomentosiformis_XP_009616512.1	nicotiana_tomentosiformis	nicotiana_tomentosiformis_XP_009616512.1
nicotiana_tomentosiformis_XP_009616514.1	nicotiana_tomentosiformis	nicotiana_tomentosiformis_XP_009616514.1
nicotiana_tomentosiformis_XP_009622262.2	nicotiana_tomentosiformis	nicotiana_tomentosiformis_XP_009622262.2
nicotiana_tomentosiformis_XP_018626636.2	nicotiana_tomentosiformis	nicotiana_tomentosiformis_XP_018626636.2
nicotiana_tomentosiformis_XP_018630703.1	nicotiana_tomentosiformis	nicotiana_tomentosiformis_XP_018630703.1
nicotiana_tomentosiformis_XP_033512327.1	nicotiana_tomentosiformis	nicotiana_tomentosiformis_XP_033512327.1
Nschscaffold17261_cov1150075650	nissolia_schottii	Nschscaffold17261_cov1150075650
Nschscaffold2435_cov1230118150	nissolia_schottii	Nschscaffold2435_cov1230118150
Nschscaffold524537_cov1080262110	nissolia_schottii	Nschscaffold524537_cov1080262110
Nschscaffold524637_cov1170270090	nissolia_schottii	Nschscaffold524637_cov1170270090
Nschscaffold766_cov1120326980	nissolia_schottii	Nschscaffold766_cov1120326980
Nschscaffold766_cov1120326990	nissolia_schottii	Nschscaffold766_cov1120326990
Ncon10395560015370	noteroclada_confluens	Ncon10395560015370
Ncon10845120039590	noteroclada_confluens	Ncon10845120039590
Ncon15444050204010	noteroclada_confluens	Ncon15444050204010
Ncon16988110439800	noteroclada_confluens	Ncon16988110439800
Ncon17065850472650	noteroclada_confluens	Ncon17065850472650
NcolGWHAAYW000000010007170.1	nymphaea_colorata	NcolGWHAAYW000000010007170.1
NcolGWHAAYW000000010007170.2	nymphaea_colorata	NcolGWHAAYW000000010007170.2
NcolGWHAAYW000000010007190.1	nymphaea_colorata	NcolGWHAAYW000000010007190.1
NcolGWHAAYW000000120206160.2	nymphaea_colorata	NcolGWHAAYW000000120206160.2