PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
NcolGWHAAYW000000120206160.4 nymphaea_colorata NcolGWHAAYW000000120206160.4
nyssa_yunnanensis_maker-291294-augustus-gene-2.15-mRNA-1 nyssa_yunnanensis nyssa_yunnanensis_maker-291294-augustus-gene-2.15-mRNA-1
nyssa_yunnanensis_maker-333-augustus-gene-7.4-mRNA-1 nyssa_yunnanensis nyssa_yunnanensis_maker-333-augustus-gene-7.4-mRNA-1
ochroma_pyramidale_OCHPYR08465_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR08465_OCHPYR
ochroma_pyramidale_OCHPYR13104_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR13104_OCHPYR
ochroma_pyramidale_OCHPYR16296_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR16296_OCHPYR
ochroma_pyramidale_OCHPYR40151_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR40151_OCHPYR
ochroma_pyramidale_OCHPYR40696_OCHPYR ochroma_pyramidale ochroma_pyramidale_OCHPYR40696_OCHPYR
ocimum_basilicum_1040.g7.t1 ocimum_basilicum ocimum_basilicum_1040.g7.t1
ocimum_basilicum_1873.g87.t1 ocimum_basilicum ocimum_basilicum_1873.g87.t1
ocimum_basilicum_1975.g183.t1 ocimum_basilicum ocimum_basilicum_1975.g183.t1
ocimum_basilicum_382430.g24.t1 ocimum_basilicum ocimum_basilicum_382430.g24.t1
ocimum_basilicum_382680.g53.t1 ocimum_basilicum ocimum_basilicum_382680.g53.t1
ocimum_basilicum_383141.g1.t1 ocimum_basilicum ocimum_basilicum_383141.g1.t1
ocimum_basilicum_385609.g3.t1 ocimum_basilicum ocimum_basilicum_385609.g3.t1
ocimum_basilicum_539277.g10.t1 ocimum_basilicum ocimum_basilicum_539277.g10.t1
ocimum_basilicum_709.g34.t1 ocimum_basilicum ocimum_basilicum_709.g34.t1
ocimum_sanctum_Ote100084950001 ocimum_sanctum ocimum_sanctum_Ote100084950001
ocimum_sanctum_Ote234354780001 ocimum_sanctum ocimum_sanctum_Ote234354780001
ocimum_sanctum_Ote235659900001 ocimum_sanctum ocimum_sanctum_Ote235659900001
Osph4635220053810 odontoschisma_sphagni Osph4635220053810
Osph4819800079910 odontoschisma_sphagni Osph4819800079910
Osph4896920109710 odontoschisma_sphagni Osph4896920109710
oldenlandia_corymbosa_CAI9087572.1 oldenlandia_corymbosa oldenlandia_corymbosa_CAI9087572.1
oldenlandia_corymbosa_CAI9087573.1 oldenlandia_corymbosa oldenlandia_corymbosa_CAI9087573.1
oldenlandia_corymbosa_CAI9087574.1 oldenlandia_corymbosa oldenlandia_corymbosa_CAI9087574.1
oldenlandia_corymbosa_CAI9088694.1 oldenlandia_corymbosa oldenlandia_corymbosa_CAI9088694.1
oldenlandia_corymbosa_CAI9098623.1 oldenlandia_corymbosa oldenlandia_corymbosa_CAI9098623.1
oldenlandia_corymbosa_CAI9107535.1 oldenlandia_corymbosa oldenlandia_corymbosa_CAI9107535.1
Oeur04G0002380.1 olea_europaea Oeur04G0002380.1