PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Pturscaffold_10044290 philonotis_turneriana Pturscaffold_10044290
Pturscaffold_30137700 philonotis_turneriana Pturscaffold_30137700
Pturscaffold_30163150 philonotis_turneriana Pturscaffold_30163150
Pturscaffold_40174280 philonotis_turneriana Pturscaffold_40174280
Pturscaffold_60265660 philonotis_turneriana Pturscaffold_60265660
Pturscaffold_60272130 philonotis_turneriana Pturscaffold_60272130
PjapPjv1Scaffold_290130110.1 phtheirospermum_japonicum PjapPjv1Scaffold_290130110.1
Peduhic_scaffold_130075000.1 phyllostachys_edulis Peduhic_scaffold_130075000.1
Peduhic_scaffold_140102490.1 phyllostachys_edulis Peduhic_scaffold_140102490.1
Peduhic_scaffold_140102500.1 phyllostachys_edulis Peduhic_scaffold_140102500.1
Peduhic_scaffold_160177340.1 phyllostachys_edulis Peduhic_scaffold_160177340.1
Peduhic_scaffold_170205800.1 phyllostachys_edulis Peduhic_scaffold_170205800.1
Peduhic_scaffold_180225760.1 phyllostachys_edulis Peduhic_scaffold_180225760.1
Peduhic_scaffold_180225770.1 phyllostachys_edulis Peduhic_scaffold_180225770.1
Peduhic_scaffold_200258280.1 phyllostachys_edulis Peduhic_scaffold_200258280.1
Peduhic_scaffold_200265840.1 phyllostachys_edulis Peduhic_scaffold_200265840.1
Peduhic_scaffold_240344810.1 phyllostachys_edulis Peduhic_scaffold_240344810.1
Peduhic_scaffold_50414400.1 phyllostachys_edulis Peduhic_scaffold_50414400.1
Peduhic_scaffold_50414410.1 phyllostachys_edulis Peduhic_scaffold_50414410.1
physalis_grisea_Phygri01g015380.1 physalis_grisea physalis_grisea_Phygri01g015380.1
physalis_grisea_Phygri01g015390.1 physalis_grisea physalis_grisea_Phygri01g015390.1
physalis_grisea_Phygri10g009070.1 physalis_grisea physalis_grisea_Phygri10g009070.1
physalis_grisea_Phygri11g014350.1 physalis_grisea physalis_grisea_Phygri11g014350.1
physalis_grisea_Phygri11g024610.1 physalis_grisea physalis_grisea_Phygri11g024610.1
physalis_pruinosa_Phypru01g015650.1 physalis_pruinosa physalis_pruinosa_Phypru01g015650.1
physalis_pruinosa_Phypru01g015660.1 physalis_pruinosa physalis_pruinosa_Phypru01g015660.1
physalis_pruinosa_Phypru10g009250.1 physalis_pruinosa physalis_pruinosa_Phypru10g009250.1
physalis_pruinosa_Phypru11g014290.1 physalis_pruinosa physalis_pruinosa_Phypru11g014290.1
physalis_pruinosa_Phypru11g024690.1 physalis_pruinosa physalis_pruinosa_Phypru11g024690.1
Ppat02G0004110.1 physcomitrella_patens Ppat02G0004110.1