PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Pcae1676230042760 porella_caespitans_var_nipponica Pcae1676230042760
Pcae2372930134380 porella_caespitans_var_nipponica Pcae2372930134380
Pchi1667250160340 porella_chinensis Pchi1667250160340
Pchi1703910275470 porella_chinensis Pchi1703910275470
Pchi1705690292490 porella_chinensis Pchi1705690292490
Ppla2520710190220 porella_platyphylla Ppla2520710190220
Ppla2524780199760 porella_platyphylla Ppla2524780199760
KAA8492843.1 porphyridium_purpureum KAA8492843.1
KAA8497237.1 porphyridium_purpureum KAA8497237.1
portulaca_amilis_FUN_001202-T1 portulaca_amilis portulaca_amilis_FUN_001202-T1
portulaca_amilis_FUN_007921-T1 portulaca_amilis portulaca_amilis_FUN_007921-T1
portulaca_amilis_FUN_024872-T1 portulaca_amilis portulaca_amilis_FUN_024872-T1
portulaca_amilis_FUN_041565-T1 portulaca_amilis portulaca_amilis_FUN_041565-T1
portulaca_amilis_FUN_052845-T1 portulaca_amilis portulaca_amilis_FUN_052845-T1
portulaca_oleracea_GWHPCBIU005308 portulaca_oleracea portulaca_oleracea_GWHPCBIU005308
portulaca_oleracea_GWHPCBIU009272 portulaca_oleracea portulaca_oleracea_GWHPCBIU009272
portulaca_oleracea_GWHPCBIU010915 portulaca_oleracea portulaca_oleracea_GWHPCBIU010915
portulaca_oleracea_GWHPCBIU013174 portulaca_oleracea portulaca_oleracea_GWHPCBIU013174
portulaca_oleracea_GWHPCBIU031193 portulaca_oleracea portulaca_oleracea_GWHPCBIU031193
portulaca_oleracea_GWHPCBIU034156 portulaca_oleracea portulaca_oleracea_GWHPCBIU034156
portulaca_oleracea_GWHPCBIU044697 portulaca_oleracea portulaca_oleracea_GWHPCBIU044697
22435_t potentilla_micrantha 22435_t
Pcol13G0002830.1 prasinoderma_coloniale Pcol13G0002830.1
primula_veris_pveT_jg24972 primula_veris primula_veris_pveT_jg24972
primula_veris_pveT_jg26239 primula_veris primula_veris_pveT_jg26239
PRvulLH_v2_00001480024010.1 primula_vulgaris PRvulLH_v2_00001480024010.1
PRvulLH_v2_00004060060560.3 primula_vulgaris PRvulLH_v2_00004060060560.3
PRvulLH_v2_00007630103060.1 primula_vulgaris PRvulLH_v2_00007630103060.1
prosopis_alba_XP_028763769.1 prosopis_alba prosopis_alba_XP_028763769.1
prosopis_alba_XP_028763881.1 prosopis_alba prosopis_alba_XP_028763881.1