PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
prosopis_alba_XP_028765586.1 prosopis_alba prosopis_alba_XP_028765586.1
prosopis_alba_XP_028765587.1 prosopis_alba prosopis_alba_XP_028765587.1
prosopis_alba_XP_028792023.1 prosopis_alba prosopis_alba_XP_028792023.1
prosopis_alba_XP_028792024.1 prosopis_alba prosopis_alba_XP_028792024.1
prosopis_alba_XP_028792040.1 prosopis_alba prosopis_alba_XP_028792040.1
prosopis_alba_XP_028792110.1 prosopis_alba prosopis_alba_XP_028792110.1
prosopis_alba_XP_028794636.1 prosopis_alba prosopis_alba_XP_028794636.1
prosopis_alba_XP_028794637.1 prosopis_alba prosopis_alba_XP_028794637.1
prosopis_alba_XP_028794639.1 prosopis_alba prosopis_alba_XP_028794639.1
prosopis_alba_XP_028800853.1 prosopis_alba prosopis_alba_XP_028800853.1
prosopis_alba_XP_028801458.1 prosopis_alba prosopis_alba_XP_028801458.1
prosopis_alba_XP_028801459.1 prosopis_alba prosopis_alba_XP_028801459.1
prosopis_alba_XP_028802500.1 prosopis_alba prosopis_alba_XP_028802500.1
protea_cynaroides_KAJ4953713.1 protea_cynaroides protea_cynaroides_KAJ4953713.1
protea_cynaroides_KAJ4961854.1 protea_cynaroides protea_cynaroides_KAJ4961854.1
protea_cynaroides_KAJ4966934.1 protea_cynaroides protea_cynaroides_KAJ4966934.1
protea_cynaroides_KAJ4968768.1 protea_cynaroides protea_cynaroides_KAJ4968768.1
protea_cynaroides_KAJ4975060.1 protea_cynaroides protea_cynaroides_KAJ4975060.1
PruarS.100031G005500.t1.p1_1 prunus_armeniaca PruarS.100031G005500.t1.p1_1
PruarS.1G418000.t1.p1_1 prunus_armeniaca PruarS.1G418000.t1.p1_1
PruarS.1G739100.t1.p1_1 prunus_armeniaca PruarS.1G739100.t1.p1_1
PruarS.4G098200.t1.p1_1 prunus_armeniaca PruarS.4G098200.t1.p1_1
PruarS.8G032500.t1.p1_1 prunus_armeniaca PruarS.8G032500.t1.p1_1
PruarS.8G313300.t1.p1_1 prunus_armeniaca PruarS.8G313300.t1.p1_1
Pav_sc0000322.1_g140.1.mk:mrna prunus_avium Pav_sc0000322.1_g140.1.mk:mrna
Pav_sc0001323.1_g1100.1.mk:mrna prunus_avium Pav_sc0001323.1_g1100.1.mk:mrna
prunus_campanulata_evm.model.Chr01.5635 prunus_campanulata prunus_campanulata_evm.model.Chr01.5635
prunus_campanulata_evm.model.Chr08.2758 prunus_campanulata prunus_campanulata_evm.model.Chr08.2758
prunus_campanulata_evm.model.Chr08.544 prunus_campanulata prunus_campanulata_evm.model.Chr08.544
prunus_domestica_Pd.00g018090.m01-v1.0 prunus_domestica prunus_domestica_Pd.00g018090.m01-v1.0