PlantSME Plant secondary metabolism enzyme database

Prunus avium (prunus_avium)

Imported from atlas release summary for Prunus avium.

1762
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 577 18 UGT (221) View species results
Alkaloid pathway 425 26 7DLGT (113) View species results
Phenylpropanoid pathway 315 12 POD (100) View species results
Flavonoid pathway 212 15 UFGT (141) View species results
Rosmarinic acid pathway 158 7 C4H (57) View species results
Steroid pathway 75 13 CAS (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1551 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 337 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Pav_co4006417.1_g010.1.mk:CDS:1 Alkaloid 16OMT medium borderline
Pav_sc0000011.1_g050.1.br:mrna Alkaloid 16OMT medium borderline
Pav_sc0000067.1_g700.1.mk:mrna Alkaloid 16OMT medium borderline
Pav_sc0000067.1_g710.1.mk:mrna Alkaloid 16OMT medium borderline
Pav_sc0000067.1_g750.1.br:mrna Alkaloid 16OMT medium borderline
Pav_sc0000373.1_g1000.1.br:mrna Alkaloid 16OMT medium borderline
Pav_sc0000373.1_g1010.1.mk:mrna Alkaloid 16OMT medium borderline
Pav_sc0000373.1_g1040.1.mk:mrna Alkaloid 16OMT medium borderline
Pav_sc0000465.1_g1260.1.mk:mrna Alkaloid 16OMT low borderline
Pav_sc0000652.1_g1110.1.br:mrna Alkaloid 16OMT medium borderline
Pav_sc0001644.1_g010.1.br:mrna Alkaloid 16OMT medium borderline
Pav_sc0001644.1_g190.1.br:mrna Alkaloid 16OMT medium borderline
Pav_sc0001900.1_g190.1.br:mrna Alkaloid 16OMT medium borderline
Pav_sc0002045.1_g020.1.mk:mrna Alkaloid 16OMT medium borderline
Pav_sc0002280.1_g410.1.mk:mrna Alkaloid 16OMT medium borderline
Pav_sc0002280.1_g420.1.br:mrna Alkaloid 16OMT medium borderline
Pav_sc0002280.1_g430.1.br:CDS:1 Alkaloid 16OMT medium borderline
Pav_sc0002280.1_g440.1.mk:mrna Alkaloid 16OMT medium borderline
Pav_sc0002802.1_g010.1.br:CDS:1 Alkaloid 16OMT medium borderline
Pav_sc0004420.1_g110.1.br:CDS:1 Alkaloid 16OMT medium borderline
Pav_sc0007012.1_g050.1.br:mrna Alkaloid 16OMT medium borderline
Pav_co3991315.1_g010.1.br:CDS:1 Alkaloid 6OMT_4OMT_SOMT medium pass
Pav_sc0000373.1_g1020.1.br:CDS:1 Alkaloid 6OMT_4OMT_SOMT medium borderline
Pav_sc0000373.1_g980.1.br:CDS:1 Alkaloid 6OMT_4OMT_SOMT medium borderline
Pav_sc0000373.1_g990.1.mk:mrna Alkaloid 6OMT_4OMT_SOMT medium borderline
Pav_sc0002271.1_g390.1.br:mrna Alkaloid 6OMT_4OMT_SOMT medium borderline
Pav_sc0002360.1_g070.1.mk:mrna Alkaloid 6OMT_4OMT_SOMT low borderline
Pav_sc0002360.1_g090.1.br:CDS:1 Alkaloid 6OMT_4OMT_SOMT medium pass
Pav_co4002883.1_g010.1.br:CDS:1 Alkaloid 7DLGT medium pass
Pav_co4045919.1_g010.1.br:mrna Alkaloid 7DLGT medium pass
Pav_co4066385.1_g020.1.br:mrna Alkaloid 7DLGT medium pass
Pav_sc0000023.1_g350.1.br:CDS:1 Alkaloid 7DLGT medium pass
Pav_sc0000023.1_g370.1.br:mrna Alkaloid 7DLGT medium pass
Pav_sc0000023.1_g380.1.br:mrna Alkaloid 7DLGT high pass
Pav_sc0000023.1_g390.1.br:mrna Alkaloid 7DLGT medium pass
Pav_sc0000023.1_g400.1.mk:mrna Alkaloid 7DLGT high pass
Pav_sc0000030.1_g1050.1.mk:mrna Alkaloid 7DLGT medium pass
Pav_sc0000030.1_g1060.1.mk:mrna Alkaloid 7DLGT low borderline
Pav_sc0000064.1_g010.1.br:CDS:1 Alkaloid 7DLGT low borderline
Pav_sc0000064.1_g020.1.br:CDS:1 Alkaloid 7DLGT low borderline
Pav_sc0000064.1_g030.1.br:CDS:1 Alkaloid 7DLGT medium pass
Pav_sc0000064.1_g040.1.br:CDS:1 Alkaloid 7DLGT low borderline
Pav_sc0000064.1_g060.1.br:CDS:1 Alkaloid 7DLGT low borderline
Pav_sc0000129.1_g300.1.mk:mrna Alkaloid 7DLGT low borderline
Pav_sc0000138.1_g030.1.mk:mrna Alkaloid 7DLGT low borderline
Pav_sc0000175.1_g380.1.mk:mrna Alkaloid 7DLGT low borderline
Pav_sc0000196.1_g010.1.br:CDS:1 Alkaloid 7DLGT medium pass
Pav_sc0000196.1_g020.1.mk:mrna Alkaloid 7DLGT medium pass
Pav_sc0000207.1_g320.1.br:mrna Alkaloid 7DLGT medium pass
Pav_sc0000207.1_g330.1.mk:mrna Alkaloid 7DLGT high pass