PlantSME Plant secondary metabolism enzyme database

Prunus avium (prunus_avium)

Imported from atlas release summary for Prunus avium.

1762
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 577 18 UGT (221) View species results
Alkaloid pathway 425 26 7DLGT (113) View species results
Phenylpropanoid pathway 315 12 POD (100) View species results
Flavonoid pathway 212 15 UFGT (141) View species results
Rosmarinic acid pathway 158 7 C4H (57) View species results
Steroid pathway 75 13 CAS (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1551 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 337 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
Pav_sc0000045.1_g280.1.mk:mrna Alkaloid PYKS high pass
Pav_sc0000045.1_g350.1.mk:mrna Alkaloid PYKS high pass
Pav_sc0000131.1_g390.1.mk:mrna Alkaloid PYKS low borderline
Pav_sc0000174.1_g320.1.mk:CDS:1 Alkaloid PYKS low borderline
Pav_sc0000370.1_g190.1.mk:mrna Alkaloid PYKS low borderline
Pav_sc0000404.1_g090.1.mk:mrna Alkaloid PYKS low borderline
Pav_sc0000465.1_g1500.1.mk:mrna Alkaloid PYKS high pass
Pav_sc0000551.1_g150.1.mk:mrna Alkaloid PYKS low borderline
Pav_sc0000554.1_g2130.1.mk:mrna Alkaloid PYKS low borderline
Pav_sc0000554.1_g2140.1.mk:mrna Alkaloid PYKS low borderline
Pav_sc0000554.1_g2150.1.br:CDS:1 Alkaloid PYKS low borderline
Pav_sc0000568.1_g020.1.mk:mrna Alkaloid PYKS high pass
Pav_sc0000586.1_g950.1.mk:CDS:1 Alkaloid PYKS low borderline
Pav_sc0000704.1_g200.1.mk:CDS:1 Alkaloid PYKS low borderline
Pav_sc0000998.1_g060.1.mk:mrna Alkaloid PYKS low borderline
Pav_sc0002441.1_g060.1.mk:mrna Alkaloid PYKS high pass
Pav_sc0002963.1_g030.1.mk:mrna Alkaloid PYKS low borderline
Pav_sc0009537.1_g010.1.mk:mrna Alkaloid PYKS medium pass