PlantSME Plant secondary metabolism enzyme database

Prunus avium (prunus_avium)

Imported from atlas release summary for Prunus avium.

1762
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 577 18 UGT (221) View species results
Alkaloid pathway 425 26 7DLGT (113) View species results
Phenylpropanoid pathway 315 12 POD (100) View species results
Flavonoid pathway 212 15 UFGT (141) View species results
Rosmarinic acid pathway 158 7 C4H (57) View species results
Steroid pathway 75 13 CAS (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1551 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 337 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Gene Pathway Family Confidence Status Best Target
Pav_sc0000055.1_g170.1.br:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Pav_sc0000055.1_g180.1.br:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Pav_sc0000108.1_g430.1.mk:CDS:1 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Pav_sc0000166.1_g030.1.br:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Pav_sc0000259.1_g320.1.mk:mrna Alkaloid TRI/TRII low borderline TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Pav_sc0000271.1_g140.1.br:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Pav_sc0000351.1_g450.1.mk:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
Pav_sc0000375.1_g450.1.br:CDS:1 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Pav_sc0000400.1_g080.1.mk:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
Pav_sc0000400.1_g090.1.br:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH
Pav_sc0000491.1_g700.1.mk:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Pav_sc0000554.1_g400.1.mk:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
Pav_sc0000563.1_g010.1.mk:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH
Pav_sc0000563.1_g030.1.mk:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
Pav_sc0000563.1_g050.1.mk:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH
Pav_sc0000675.1_g400.1.br:mrna Alkaloid TRI/TRII low borderline TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
Pav_sc0000780.1_g240.1.mk:mrna Alkaloid TRI/TRII low borderline TRI_TRII__00005__sp_P50162_TRN1_DATST
Pav_sc0000893.1_g1150.1.mk:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Pav_sc0001080.1_g360.1.mk:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Pav_sc0001084.1_g190.1.mk:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
Pav_sc0001280.1_g120.1.mk:mrna Alkaloid TRI/TRII low borderline TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
Pav_sc0001341.1_g600.1.mk:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Pav_sc0001342.1_g240.1.mk:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
Pav_sc0001736.1_g020.1.mk:mrna Alkaloid TRI/TRII low borderline TRI_TRII__00005__sp_P50162_TRN1_DATST
Pav_sc0001992.1_g020.1.mk:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Pav_sc0002130.1_g010.1.mk:mrna Alkaloid TRI/TRII low borderline TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
Pav_sc0002451.1_g200.1.mk:mrna Alkaloid TRI/TRII low borderline TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
Pav_sc0002451.1_g230.1.mk:mrna Alkaloid TRI/TRII low borderline TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
Pav_sc0002858.1_g210.1.br:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
Pav_sc0002858.1_g270.1.br:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH
Pav_sc0002858.1_g280.1.br:mrna Alkaloid TRI/TRII low borderline TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH
Pav_sc0002858.1_g290.1.br:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH
Pav_sc0002858.1_g310.1.mk:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
Pav_sc0002914.1_g050.1.br:CDS:1 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Pav_sc0005509.1_g020.1.mk:CDS:1 Alkaloid TRI/TRII low borderline TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Pav_sc0005957.1_g010.1.mk:CDS:1 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Pav_sc0006892.1_g050.1.mk:mrna Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB