PlantSME Plant secondary metabolism enzyme database

Prunus avium (prunus_avium)

Imported from atlas release summary for Prunus avium.

1762
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 577 18 UGT (221) View species results
Alkaloid pathway 425 26 7DLGT (113) View species results
Phenylpropanoid pathway 315 12 POD (100) View species results
Flavonoid pathway 212 15 UFGT (141) View species results
Rosmarinic acid pathway 158 7 C4H (57) View species results
Steroid pathway 75 13 CAS (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1551 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 337 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F5H/CYP84A
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Gene Pathway Family Confidence Status Best Target
Pav_sc0000044.1_g890.1.mk:CDS:1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pav_sc0000091.1_g500.1.mk:mrna Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pav_sc0000099.1_g460.1.mk:mrna Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pav_sc0000103.1_g1970.1.mk:mrna Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pav_sc0000129.1_g1110.1.br:CDS:1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pav_sc0000351.1_g190.1.mk:mrna Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pav_sc0000358.1_g010.1.mk:CDS:1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pav_sc0000370.1_g570.1.br:mrna Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pav_sc0000558.1_g530.1.mk:mrna Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pav_sc0000558.1_g600.1.mk:mrna Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pav_sc0000586.1_g760.1.mk:mrna Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pav_sc0000667.1_g750.1.br:mrna Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pav_sc0000747.1_g430.1.mk:CDS:1 Phenylpropanoid F5H/CYP84A low borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pav_sc0000747.1_g500.1.br:CDS:1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pav_sc0000747.1_g540.1.mk:mrna Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pav_sc0000886.1_g210.1.mk:CDS:1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pav_sc0001355.1_g060.1.mk:CDS:1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pav_sc0001540.1_g130.1.mk:mrna Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pav_sc0002598.1_g030.1.br:mrna Phenylpropanoid F5H/CYP84A medium pass F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pav_sc0004874.1_g020.1.br:mrna Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pav_sc0009120.1_g010.1.mk:mrna Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH