PlantSME Plant secondary metabolism enzyme database

Prunus avium (prunus_avium)

Imported from atlas release summary for Prunus avium.

1762
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 577 18 UGT (221) View species results
Alkaloid pathway 425 26 7DLGT (113) View species results
Phenylpropanoid pathway 315 12 POD (100) View species results
Flavonoid pathway 212 15 UFGT (141) View species results
Rosmarinic acid pathway 158 7 C4H (57) View species results
Steroid pathway 75 13 CAS (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1551 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 337 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Pav_sc0000071.1_g120.1.mk:mrna Rosmarinic Acid 4CL medium pass
Pav_sc0000091.1_g340.1.mk:mrna Rosmarinic Acid 4CL medium pass
Pav_sc0000127.1_g160.1.mk:CDS:1 Rosmarinic Acid 4CL medium pass
Pav_sc0000157.1_g950.1.mk:mrna Rosmarinic Acid 4CL low borderline
Pav_sc0000195.1_g940.1.mk:mrna Rosmarinic Acid 4CL low borderline
Pav_sc0000351.1_g340.1.mk:mrna Rosmarinic Acid 4CL medium pass
Pav_sc0000359.1_g100.1.mk:mrna Rosmarinic Acid 4CL medium pass
Pav_sc0000367.1_g080.1.mk:mrna Rosmarinic Acid 4CL medium pass
Pav_sc0000414.1_g020.1.mk:mrna Rosmarinic Acid 4CL medium pass
Pav_sc0000414.1_g030.1.mk:mrna Rosmarinic Acid 4CL medium pass
Pav_sc0000415.1_g050.1.mk:mrna Rosmarinic Acid 4CL low borderline
Pav_sc0000415.1_g220.1.mk:mrna Rosmarinic Acid 4CL low borderline
Pav_sc0000480.1_g840.1.mk:mrna Rosmarinic Acid 4CL medium pass
Pav_sc0000481.1_g040.1.mk:mrna Rosmarinic Acid 4CL low borderline
Pav_sc0000491.1_g040.1.mk:mrna Rosmarinic Acid 4CL medium pass
Pav_sc0000491.1_g450.1.mk:mrna Rosmarinic Acid 4CL low borderline
Pav_sc0000598.1_g610.1.mk:CDS:1 Rosmarinic Acid 4CL medium pass
Pav_sc0000599.1_g090.1.mk:mrna Rosmarinic Acid 4CL medium pass
Pav_sc0000636.1_g260.1.mk:mrna Rosmarinic Acid 4CL medium pass
Pav_sc0000700.1_g230.1.mk:mrna Rosmarinic Acid 4CL low borderline
Pav_sc0000754.1_g730.1.mk:mrna Rosmarinic Acid 4CL medium pass
Pav_sc0000762.1_g110.1.mk:mrna Rosmarinic Acid 4CL medium pass
Pav_sc0000863.1_g410.1.mk:mrna Rosmarinic Acid 4CL medium pass
Pav_sc0001014.1_g030.1.mk:mrna Rosmarinic Acid 4CL low borderline
Pav_sc0001080.1_g050.1.mk:mrna Rosmarinic Acid 4CL low borderline
Pav_sc0001124.1_g410.1.mk:mrna Rosmarinic Acid 4CL medium pass
Pav_sc0001275.1_g220.1.mk:CDS:1 Rosmarinic Acid 4CL medium pass
Pav_sc0001710.1_g1400.1.mk:mrna Rosmarinic Acid 4CL low borderline
Pav_sc0001983.1_g030.1.mk:mrna Rosmarinic Acid 4CL medium pass
Pav_sc0001983.1_g050.1.br:CDS:1 Rosmarinic Acid 4CL medium pass
Pav_sc0001983.1_g110.1.mk:mrna Rosmarinic Acid 4CL medium pass
Pav_sc0002960.1_g080.1.mk:mrna Rosmarinic Acid 4CL medium pass
Pav_sc0003169.1_g160.1.mk:mrna Rosmarinic Acid 4CL low borderline
Pav_sc0003292.1_g030.1.mk:mrna Rosmarinic Acid 4CL low borderline
Pav_sc0004687.1_g050.1.mk:mrna Rosmarinic Acid 4CL medium pass
Pav_sc0006281.1_g050.1.mk:mrna Rosmarinic Acid 4CL medium pass
Pav_co3996163.1_g010.1.br:CDS:1 Rosmarinic Acid C4H low borderline
Pav_co4022821.1_g010.1.br:CDS:1 Rosmarinic Acid C4H low borderline
Pav_co4023071.1_g010.1.br:CDS:1 Rosmarinic Acid C4H low borderline
Pav_co4029819.1_g010.1.br:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000040.1_g810.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000044.1_g890.1.mk:CDS:1 Rosmarinic Acid C4H low borderline
Pav_sc0000045.1_g430.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000049.1_g010.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000060.1_g040.1.br:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000069.1_g580.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000069.1_g620.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000071.1_g050.1.br:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000071.1_g130.1.br:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000071.1_g140.1.br:mrna Rosmarinic Acid C4H low borderline