Prunus avium (prunus_avium)
Imported from atlas release summary for Prunus avium.
1762
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1762
Candidate Genes
C4H
7.03%
BAHD
5.97%
UGT
5.8%
C3'H/CYP98A
5.49%
7DLGT
4.31%
CYP76
4.12%
IFS
4.04%
UFGT
3.92%
Other Families
59.33%
More Families (96)
POD
119
2.86%
T3O
118
2.84%
F3H
113
2.72%
4CL
108
2.6%
DWF4/CYP90B1
86
2.07%
NMT
76
1.83%
CAD
75
1.81%
H6H
73
1.76%
STR
64
1.54%
CODM/T6ODM
61
1.47%
F3'H/CYP75B
61
1.47%
BR6OX2/CYP85A2
61
1.47%
SGD
58
1.4%
HCT
56
1.35%
GS
55
1.32%
TAT
53
1.28%
TPS
51
1.23%
G8O/G8H
49
1.18%
T16H
48
1.16%
GES
44
1.06%
CAS
43
1.03%
CSE
42
1.01%
LAC
41
0.99%
CYP71
38
0.91%
TRI/TRII
37
0.89%
BBE
37
0.89%
FNS
36
0.87%
CYP90D1
36
0.87%
COMT
35
0.84%
IO
33
0.79%
7DLH
33
0.79%
RAS
33
0.79%
SMT1/SMT2/SMT3
32
0.77%
CCR
28
0.67%
NCS
27
0.65%
ANR
26
0.63%
IFR
26
0.63%
PMT
24
0.58%
F3'5'H/CYP75A
23
0.55%
BR6OX1/CYP85A1
22
0.53%
16OMT
21
0.51%
LAMT
21
0.51%
F5H/CYP84A
21
0.51%
PYKS
18
0.43%
DFR
18
0.43%
CPD/CYP90A1
16
0.39%
COR
15
0.36%
SLS
14
0.34%
8HGO
14
0.34%
ANS/LDOX
12
0.29%
DWF7
12
0.29%
CCoAOMT
11
0.26%
CYP51G1
11
0.26%
ROT3/CYP90C1
10
0.24%
ISY
9
0.22%
PAL
9
0.22%
SQE
9
0.22%
MPO
8
0.19%
6OMT_4OMT_SOMT
7
0.17%
CNMT
7
0.17%
CYP80B1
7
0.17%
TYDC_DDC
6
0.14%
CHS
6
0.14%
FLS
6
0.14%
CPR
6
0.14%
AACT
6
0.14%
FPPS
6
0.14%
HPPR
5
0.12%
GGPPS
5
0.12%
ODC
4
0.1%
XMT_MXMT_DXMT
4
0.1%
CHI
4
0.1%
DET2
4
0.1%
SQS/FDFT1
4
0.1%
HMGR
4
0.1%
DXS
4
0.1%
CYP719
3
0.07%
SMO1/SMO2
3
0.07%
MVD
3
0.07%
MVK
3
0.07%
PMK
3
0.07%
MCT/IspD
3
0.07%
CYP80F1
2
0.05%
TDC
2
0.05%
HYD1
2
0.05%
DWF5
2
0.05%
FK
2
0.05%
DXR
2
0.05%
HDR/IspH
2
0.05%
MDS/IspF
2
0.05%
ADC
1
0.02%
CPI1
1
0.02%
DWF1
1
0.02%
HMGS
1
0.02%
CMK/IspE
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 577 | 18 | UGT (221) | View species results |
| Alkaloid pathway | 425 | 26 | 7DLGT (113) | View species results |
| Phenylpropanoid pathway | 315 | 12 | POD (100) | View species results |
| Flavonoid pathway | 212 | 15 | UFGT (141) | View species results |
| Rosmarinic acid pathway | 158 | 7 | C4H (57) | View species results |
| Steroid pathway | 75 | 13 | CAS (34) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1551 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 337 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Pav_co4017001.1_g010.1.br:mrna | Alkaloid | H6H | low | borderline |
| Pav_co4036383.1_g010.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000024.1_g270.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000024.1_g280.1.br:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000024.1_g290.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000024.1_g340.1.br:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000027.1_g360.1.br:CDS:1 | Alkaloid | H6H | low | borderline |
| Pav_sc0000027.1_g380.1.br:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000027.1_g390.1.mk:CDS:1 | Alkaloid | H6H | low | borderline |
| Pav_sc0000027.1_g400.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000044.1_g550.1.mk:mrna | Alkaloid | H6H | high | pass |
| Pav_sc0000072.1_g640.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000095.1_g1110.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000102.1_g420.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000113.1_g730.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000119.1_g030.1.br:mrna | Alkaloid | H6H | medium | borderline |
| Pav_sc0000119.1_g060.1.mk:mrna | Alkaloid | H6H | medium | borderline |
| Pav_sc0000143.1_g470.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000195.1_g960.1.mk:mrna | Alkaloid | H6H | medium | borderline |
| Pav_sc0000367.1_g290.1.mk:mrna | Alkaloid | H6H | medium | pass |
| Pav_sc0000379.1_g020.1.mk:CDS:1 | Alkaloid | H6H | low | borderline |
| Pav_sc0000379.1_g040.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000379.1_g050.1.br:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000379.1_g060.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000379.1_g070.1.br:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000409.1_g220.1.mk:mrna | Alkaloid | H6H | medium | pass |
| Pav_sc0000409.1_g310.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000431.1_g070.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000465.1_g550.1.mk:mrna | Alkaloid | H6H | medium | borderline |
| Pav_sc0000465.1_g880.1.br:mrna | Alkaloid | H6H | medium | borderline |
| Pav_sc0000491.1_g490.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000549.1_g700.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000549.1_g720.1.mk:mrna | Alkaloid | H6H | medium | borderline |
| Pav_sc0000549.1_g850.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000583.1_g400.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000583.1_g460.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000583.1_g550.1.mk:mrna | Alkaloid | H6H | high | pass |
| Pav_sc0000583.1_g560.1.mk:CDS:1 | Alkaloid | H6H | low | borderline |
| Pav_sc0000583.1_g620.1.br:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000652.1_g1120.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000714.1_g280.1.br:mrna | Alkaloid | H6H | medium | pass |
| Pav_sc0000714.1_g330.1.br:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000714.1_g350.1.br:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000714.1_g390.1.br:CDS:1 | Alkaloid | H6H | low | borderline |
| Pav_sc0000716.1_g380.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000716.1_g390.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000716.1_g410.1.mk:CDS:1 | Alkaloid | H6H | low | borderline |
| Pav_sc0000716.1_g420.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000759.1_g320.1.mk:mrna | Alkaloid | H6H | low | borderline |
| Pav_sc0000800.1_g110.1.br:CDS:1 | Alkaloid | H6H | low | borderline |