Prunus avium (prunus_avium)
Imported from atlas release summary for Prunus avium.
1762
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1762
Candidate Genes
C4H
7.03%
BAHD
5.97%
UGT
5.8%
C3'H/CYP98A
5.49%
7DLGT
4.31%
CYP76
4.12%
IFS
4.04%
UFGT
3.92%
Other Families
59.33%
More Families (96)
POD
119
2.86%
T3O
118
2.84%
F3H
113
2.72%
4CL
108
2.6%
DWF4/CYP90B1
86
2.07%
NMT
76
1.83%
CAD
75
1.81%
H6H
73
1.76%
STR
64
1.54%
CODM/T6ODM
61
1.47%
F3'H/CYP75B
61
1.47%
BR6OX2/CYP85A2
61
1.47%
SGD
58
1.4%
HCT
56
1.35%
GS
55
1.32%
TAT
53
1.28%
TPS
51
1.23%
G8O/G8H
49
1.18%
T16H
48
1.16%
GES
44
1.06%
CAS
43
1.03%
CSE
42
1.01%
LAC
41
0.99%
CYP71
38
0.91%
TRI/TRII
37
0.89%
BBE
37
0.89%
FNS
36
0.87%
CYP90D1
36
0.87%
COMT
35
0.84%
IO
33
0.79%
7DLH
33
0.79%
RAS
33
0.79%
SMT1/SMT2/SMT3
32
0.77%
CCR
28
0.67%
NCS
27
0.65%
ANR
26
0.63%
IFR
26
0.63%
PMT
24
0.58%
F3'5'H/CYP75A
23
0.55%
BR6OX1/CYP85A1
22
0.53%
16OMT
21
0.51%
LAMT
21
0.51%
F5H/CYP84A
21
0.51%
PYKS
18
0.43%
DFR
18
0.43%
CPD/CYP90A1
16
0.39%
COR
15
0.36%
SLS
14
0.34%
8HGO
14
0.34%
ANS/LDOX
12
0.29%
DWF7
12
0.29%
CCoAOMT
11
0.26%
CYP51G1
11
0.26%
ROT3/CYP90C1
10
0.24%
ISY
9
0.22%
PAL
9
0.22%
SQE
9
0.22%
MPO
8
0.19%
6OMT_4OMT_SOMT
7
0.17%
CNMT
7
0.17%
CYP80B1
7
0.17%
TYDC_DDC
6
0.14%
CHS
6
0.14%
FLS
6
0.14%
CPR
6
0.14%
AACT
6
0.14%
FPPS
6
0.14%
HPPR
5
0.12%
GGPPS
5
0.12%
ODC
4
0.1%
XMT_MXMT_DXMT
4
0.1%
CHI
4
0.1%
DET2
4
0.1%
SQS/FDFT1
4
0.1%
HMGR
4
0.1%
DXS
4
0.1%
CYP719
3
0.07%
SMO1/SMO2
3
0.07%
MVD
3
0.07%
MVK
3
0.07%
PMK
3
0.07%
MCT/IspD
3
0.07%
CYP80F1
2
0.05%
TDC
2
0.05%
HYD1
2
0.05%
DWF5
2
0.05%
FK
2
0.05%
DXR
2
0.05%
HDR/IspH
2
0.05%
MDS/IspF
2
0.05%
ADC
1
0.02%
CPI1
1
0.02%
DWF1
1
0.02%
HMGS
1
0.02%
CMK/IspE
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 577 | 18 | UGT (221) | View species results |
| Alkaloid pathway | 425 | 26 | 7DLGT (113) | View species results |
| Phenylpropanoid pathway | 315 | 12 | POD (100) | View species results |
| Flavonoid pathway | 212 | 15 | UFGT (141) | View species results |
| Rosmarinic acid pathway | 158 | 7 | C4H (57) | View species results |
| Steroid pathway | 75 | 13 | CAS (34) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1551 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 337 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Pav_co3991025.1_g010.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Pav_co4017443.1_g010.1.mk:CDS:1 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| Pav_co4034019.1_g010.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Pav_co4072089.1_g010.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Pav_co4088935.1_g020.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| Pav_sc0000006.1_g330.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Pav_sc0000009.1_g1050.1.mk:CDS:1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Pav_sc0000017.1_g020.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| Pav_sc0000028.1_g180.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| Pav_sc0000028.1_g820.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00007__sp_P0C5C9_REHYA_ORYSJ |
| Pav_sc0000044.1_g050.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Pav_sc0000044.1_g290.1.mk:mrna | Phenylpropanoid | POD | low | borderline | POD__00011__sp_Q05431_APX1_ARATH |
| Pav_sc0000067.1_g030.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| Pav_sc0000099.1_g130.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Pav_sc0000103.1_g1140.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00024__sp_Q9SCX8_PPA17_ARATH |
| Pav_sc0000103.1_g1520.1.mk:mrna | Phenylpropanoid | POD | low | borderline | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Pav_sc0000129.1_g1610.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00016__sp_Q6QPJ6_PRXQ_POPJC |
| Pav_sc0000131.1_g1090.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Pav_sc0000138.1_g500.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Pav_sc0000146.1_g100.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| Pav_sc0000169.1_g040.1.br:mrna | Phenylpropanoid | POD | low | borderline | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Pav_sc0000195.1_g500.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00015__sp_Q69SV0_APX8_ORYSJ |
| Pav_sc0000203.1_g110.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Pav_sc0000207.1_g1260.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Pav_sc0000212.1_g310.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00003__sp_A9PCL4_PRX2_POPTR |
| Pav_sc0000216.1_g580.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Pav_sc0000220.1_g740.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Pav_sc0000290.1_g230.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Pav_sc0000311.1_g910.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Pav_sc0000323.1_g480.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00020__sp_Q9FE01_APX2_ORYSJ |
| Pav_sc0000363.1_g130.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00026__sp_Q9XEX2_PRX2B_ARATH |
| Pav_sc0000363.1_g760.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Pav_sc0000363.1_g780.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Pav_sc0000373.1_g340.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00012__sp_Q10N21_APX1_ORYSJ |
| Pav_sc0000375.1_g270.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| Pav_sc0000375.1_g290.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| Pav_sc0000375.1_g300.1.mk:mrna | Phenylpropanoid | POD | low | borderline | POD__00001__sp_A5H452_PER70_MAIZE |
| Pav_sc0000381.1_g180.1.mk:mrna | Phenylpropanoid | POD | low | borderline | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Pav_sc0000405.1_g040.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Pav_sc0000431.1_g130.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Pav_sc0000467.1_g500.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Pav_sc0000525.1_g420.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Pav_sc0000588.1_g440.1.mk:mrna | Phenylpropanoid | POD | low | borderline | POD__00001__sp_A5H452_PER70_MAIZE |
| Pav_sc0000593.1_g010.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Pav_sc0000593.1_g020.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Pav_sc0000599.1_g140.1.mk:mrna | Phenylpropanoid | POD | low | borderline | POD__00006__sp_O22850_GPX3_ARATH |
| Pav_sc0000599.1_g150.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| Pav_sc0000616.1_g310.1.mk:mrna | Phenylpropanoid | POD | low | borderline | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Pav_sc0000624.1_g2540.1.mk:mrna | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Pav_sc0000639.1_g060.1.mk:mrna | Phenylpropanoid | POD | medium | borderline | POD__00010__sp_P84516_PER1_SORBI |