PlantSME Plant secondary metabolism enzyme database

Prunus avium (prunus_avium)

Imported from atlas release summary for Prunus avium.

1762
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 577 18 UGT (221) View species results
Alkaloid pathway 425 26 7DLGT (113) View species results
Phenylpropanoid pathway 315 12 POD (100) View species results
Flavonoid pathway 212 15 UFGT (141) View species results
Rosmarinic acid pathway 158 7 C4H (57) View species results
Steroid pathway 75 13 CAS (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1551 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 337 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
Pav_co3996163.1_g010.1.br:CDS:1 Alkaloid T16H medium borderline
Pav_co4023071.1_g010.1.br:CDS:1 Alkaloid T16H medium borderline
Pav_sc0000071.1_g720.1.mk:mrna Alkaloid T16H medium borderline
Pav_sc0000091.1_g500.1.mk:mrna Alkaloid T16H low borderline
Pav_sc0000099.1_g960.1.mk:mrna Alkaloid T16H medium borderline
Pav_sc0000129.1_g1110.1.br:CDS:1 Alkaloid T16H medium borderline
Pav_sc0000176.1_g130.1.mk:mrna Alkaloid T16H medium borderline
Pav_sc0000212.1_g920.1.mk:CDS:1 Alkaloid T16H medium borderline
Pav_sc0000229.1_g480.1.br:CDS:1 Alkaloid T16H low borderline
Pav_sc0000258.1_g020.1.br:CDS:1 Alkaloid T16H medium borderline
Pav_sc0000258.1_g130.1.br:mrna Alkaloid T16H medium borderline
Pav_sc0000261.1_g120.1.br:mrna Alkaloid T16H medium borderline
Pav_sc0000358.1_g560.1.mk:mrna Alkaloid T16H medium borderline
Pav_sc0000370.1_g650.1.br:CDS:1 Alkaloid T16H medium borderline
Pav_sc0000383.1_g560.1.br:mrna Alkaloid T16H medium borderline
Pav_sc0000412.1_g680.1.br:mrna Alkaloid T16H medium borderline
Pav_sc0000514.1_g250.1.br:mrna Alkaloid T16H medium borderline
Pav_sc0000558.1_g570.1.br:mrna Alkaloid T16H medium borderline
Pav_sc0000558.1_g610.1.br:CDS:1 Alkaloid T16H medium borderline
Pav_sc0000558.1_g630.1.br:CDS:1 Alkaloid T16H medium borderline
Pav_sc0000562.1_g100.1.mk:mrna Alkaloid T16H medium borderline
Pav_sc0000586.1_g150.1.mk:mrna Alkaloid T16H medium borderline
Pav_sc0000667.1_g740.1.br:CDS:1 Alkaloid T16H medium borderline
Pav_sc0000667.1_g750.1.br:mrna Alkaloid T16H medium borderline
Pav_sc0000747.1_g500.1.br:CDS:1 Alkaloid T16H medium borderline
Pav_sc0000747.1_g540.1.mk:mrna Alkaloid T16H medium borderline
Pav_sc0000852.1_g120.1.mk:mrna Alkaloid T16H medium borderline
Pav_sc0000852.1_g210.1.mk:mrna Alkaloid T16H medium pass
Pav_sc0000890.1_g1130.1.br:mrna Alkaloid T16H medium pass
Pav_sc0000935.1_g070.1.mk:mrna Alkaloid T16H low borderline
Pav_sc0001080.1_g980.1.br:mrna Alkaloid T16H medium borderline
Pav_sc0001134.1_g190.1.mk:mrna Alkaloid T16H medium borderline
Pav_sc0001248.1_g320.1.mk:mrna Alkaloid T16H medium borderline
Pav_sc0001540.1_g130.1.mk:mrna Alkaloid T16H medium borderline
Pav_sc0001543.1_g050.1.mk:mrna Alkaloid T16H low borderline
Pav_sc0001770.1_g060.1.br:CDS:1 Alkaloid T16H medium borderline
Pav_sc0001922.1_g030.1.br:mrna Alkaloid T16H medium borderline
Pav_sc0002230.1_g150.1.br:CDS:1 Alkaloid T16H low borderline
Pav_sc0002234.1_g030.1.mk:mrna Alkaloid T16H medium borderline
Pav_sc0002598.1_g030.1.br:mrna Alkaloid T16H medium borderline
Pav_sc0002598.1_g040.1.br:CDS:1 Alkaloid T16H low borderline
Pav_sc0002863.1_g030.1.mk:CDS:1 Alkaloid T16H medium borderline
Pav_sc0003283.1_g040.1.mk:mrna Alkaloid T16H medium borderline
Pav_sc0003418.1_g010.1.br:mrna Alkaloid T16H medium borderline
Pav_sc0003614.1_g300.1.br:mrna Alkaloid T16H low borderline
Pav_sc0003738.1_g020.1.mk:mrna Alkaloid T16H medium borderline
Pav_sc0006018.1_g020.1.mk:mrna Alkaloid T16H low borderline
Pav_sc0011125.1_g020.1.br:CDS:1 Alkaloid T16H medium borderline