PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
scalesia_atractyloides_maker-chr_7-augustus-gene-821.18-mRNA-1 scalesia_atractyloides scalesia_atractyloides_maker-chr_7-augustus-gene-821.18-mRNA-1
Scapania2196520017040 scapania Scapania2196520017040
Scapania2412360103510 scapania Scapania2412360103510
Scapania2473470338270 scapania Scapania2473470338270
Scapania2476340346440 scapania Scapania2476340346440
Scapania2477710352000 scapania Scapania2477710352000
Snep2196520017040 scapania_nepalensis Snep2196520017040
Snep2412360103510 scapania_nepalensis Snep2412360103510
Snep2473470338270 scapania_nepalensis Snep2473470338270
Snep2476340346440 scapania_nepalensis Snep2476340346440
Snep2477710352000 scapania_nepalensis Snep2477710352000
Scup1801350062360 schistidium_cupulare Scup1801350062360
Scup1807460067950 schistidium_cupulare Scup1807460067950
Scup1835540105590 schistidium_cupulare Scup1835540105590
Scup1857360159920 schistidium_cupulare Scup1857360159920
Scup1866570190970 schistidium_cupulare Scup1866570190970
SCpencontig_2550055470 schistostega_pennata SCpencontig_2550055470
SCpencontig_26620057420 schistostega_pennata SCpencontig_26620057420
SCpencontig_32970070030 schistostega_pennata SCpencontig_32970070030
SCpencontig_38570101760 schistostega_pennata SCpencontig_38570101760
SCpencontig_38570101770 schistostega_pennata SCpencontig_38570101770
SCpencontig_54230136370 schistostega_pennata SCpencontig_54230136370
schrenkiella_parvula_Sp1g24170.1 schrenkiella_parvula schrenkiella_parvula_Sp1g24170.1
schrenkiella_parvula_Sp1g32730.1 schrenkiella_parvula schrenkiella_parvula_Sp1g32730.1
Sbirscaffold1492_cov3190029840 sclerocarya_birrea Sbirscaffold1492_cov3190029840
scurrula_parasitica_var._graciliflora_SPA08587 scurrula_parasitica_var_graciliflora scurrula_parasitica_var._graciliflora_SPA08587
scurrula_parasitica_var._graciliflora_SPA23215 scurrula_parasitica_var_graciliflora scurrula_parasitica_var._graciliflora_SPA23215
scutellaria_barbata_GWHPAOTP023946 scutellaria_barbata scutellaria_barbata_GWHPAOTP023946
Scer01G0005460.1 secale_cereale Scer01G0005460.1
Scer02G0030620.1 secale_cereale Scer02G0030620.1