PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Smil03G0015060.1 salvia_miltiorrhiza Smil03G0015060.1
salvia_rosmarinus_1428.g7.t1 salvia_rosmarinus salvia_rosmarinus_1428.g7.t1
salvia_rosmarinus_1428.g7.t1.1.5db21188 salvia_rosmarinus salvia_rosmarinus_1428.g7.t1.1.5db21188
ScucSacu_v1.1_s00020005590 salvinia_cucullata ScucSacu_v1.1_s00020005590
ScucSacu_v1.1_s00120033980 salvinia_cucullata ScucSacu_v1.1_s00120033980
ScucSacu_v1.1_s01870174560 salvinia_cucullata ScucSacu_v1.1_s01870174560
Suncscaffold_110024270 sanionia_uncinata Suncscaffold_110024270
Suncscaffold_110036570 sanionia_uncinata Suncscaffold_110036570
Suncscaffold_50195980 sanionia_uncinata Suncscaffold_50195980
Suncscaffold_70251140 sanionia_uncinata Suncscaffold_70251140
Suncscaffold_90287430 sanionia_uncinata Suncscaffold_90287430
santalum_album_GWHPCBHT004737 santalum_album santalum_album_GWHPCBHT004737
santalum_album_GWHPCBHT014668 santalum_album santalum_album_GWHPCBHT014668
santalum_album_GWHPCBHT015547 santalum_album santalum_album_GWHPCBHT015547
santalum_yasi_GWHPCBIR003229 santalum_yasi santalum_yasi_GWHPCBIR003229
santalum_yasi_GWHPCBIR014106 santalum_yasi santalum_yasi_GWHPCBIR014106
sapria_himalayana_SHI09286-RA sapria_himalayana sapria_himalayana_SHI09286-RA
sapria_himalayana_SHI10485-RA sapria_himalayana sapria_himalayana_SHI10485-RA
sapria_himalayana_SHI38231-RA sapria_himalayana sapria_himalayana_SHI38231-RA
SAchi03G0020290.1 saururus_chinensis SAchi03G0020290.1
SAchi05G0007940.1 saururus_chinensis SAchi05G0007940.1
SAchi05G0008570.1 saururus_chinensis SAchi05G0008570.1
SAchi07G0011680.1 saururus_chinensis SAchi07G0011680.1
SAchi07G0014210.1 saururus_chinensis SAchi07G0014210.1
scalesia_atractyloides_maker-chr_10-snap-gene-322.0-mRNA-1 scalesia_atractyloides scalesia_atractyloides_maker-chr_10-snap-gene-322.0-mRNA-1
scalesia_atractyloides_maker-chr_11-snap-gene-45.6-mRNA-1 scalesia_atractyloides scalesia_atractyloides_maker-chr_11-snap-gene-45.6-mRNA-1
scalesia_atractyloides_maker-chr_22-snap-gene-680.5-mRNA-1 scalesia_atractyloides scalesia_atractyloides_maker-chr_22-snap-gene-680.5-mRNA-1
scalesia_atractyloides_maker-chr_23-snap-gene-363.3-mRNA-1 scalesia_atractyloides scalesia_atractyloides_maker-chr_23-snap-gene-363.3-mRNA-1
scalesia_atractyloides_maker-chr_4-augustus-gene-918.8-mRNA-1 scalesia_atractyloides scalesia_atractyloides_maker-chr_4-augustus-gene-918.8-mRNA-1
scalesia_atractyloides_maker-chr_5-snap-gene-909.3-mRNA-1 scalesia_atractyloides scalesia_atractyloides_maker-chr_5-snap-gene-909.3-mRNA-1