PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
salix_arbutifolia_GWHPBDOB010517 salix_arbutifolia salix_arbutifolia_GWHPBDOB010517
salix_arbutifolia_GWHPBDOB011836 salix_arbutifolia salix_arbutifolia_GWHPBDOB011836
salix_arbutifolia_GWHPBDOB024949 salix_arbutifolia salix_arbutifolia_GWHPBDOB024949
salix_arbutifolia_GWHPBDOB028757 salix_arbutifolia salix_arbutifolia_GWHPBDOB028757
salix_arbutifolia_GWHPBDOB028758 salix_arbutifolia salix_arbutifolia_GWHPBDOB028758
Sbra02G0003760.1 salix_brachista Sbra02G0003760.1
Sbra03G0009550.1 salix_brachista Sbra03G0009550.1
Sbra12G0005560.1 salix_brachista Sbra12G0005560.1
Sbra18G0010310.1 salix_brachista Sbra18G0010310.1
salix_chaenomeloides_GWHPBDOA005381 salix_chaenomeloides salix_chaenomeloides_GWHPBDOA005381
salix_chaenomeloides_GWHPBDOA006688 salix_chaenomeloides salix_chaenomeloides_GWHPBDOA006688
salix_chaenomeloides_GWHPBDOA007969 salix_chaenomeloides salix_chaenomeloides_GWHPBDOA007969
salix_chaenomeloides_GWHPBDOA014818 salix_chaenomeloides salix_chaenomeloides_GWHPBDOA014818
salix_dunnii_KAF9682737.1 salix_dunnii salix_dunnii_KAF9682737.1
salix_dunnii_KAF9687093.1 salix_dunnii salix_dunnii_KAF9687093.1
salix_dunnii_KAF9688488.1 salix_dunnii salix_dunnii_KAF9688488.1
salix_purpurea_Sapur.002G054600.1.p salix_purpurea salix_purpurea_Sapur.002G054600.1.p
salix_purpurea_Sapur.003G125600.1.p salix_purpurea salix_purpurea_Sapur.003G125600.1.p
salix_purpurea_Sapur.005G149800.1.p salix_purpurea salix_purpurea_Sapur.005G149800.1.p
salix_purpurea_Sapur.005G149900.1.p salix_purpurea salix_purpurea_Sapur.005G149900.1.p
salix_suchowensis_KAG5224909.1 salix_suchowensis salix_suchowensis_KAG5224909.1
salix_suchowensis_KAG5246038.1 salix_suchowensis salix_suchowensis_KAG5246038.1
salix_suchowensis_KAG5249674.1 salix_suchowensis salix_suchowensis_KAG5249674.1
salix_suchowensis_KAG5250733.1 salix_suchowensis salix_suchowensis_KAG5250733.1
salix_suchowensis_KAG5252292.1 salix_suchowensis salix_suchowensis_KAG5252292.1
Sbow05G0027550.1 salvia_bowleyana Sbow05G0027550.1
Sbow05G0027960.1 salvia_bowleyana Sbow05G0027960.1
Sbow05G0028800.1 salvia_bowleyana Sbow05G0028800.1
Sbow08G0015110.1 salvia_bowleyana Sbow08G0015110.1
Smil03G0015040.1 salvia_miltiorrhiza Smil03G0015040.1