PlantSME Plant secondary metabolism enzyme database
TYDC_DDC

TYDC_DDC

Atlas summary family TYDC_DDC.

Lineage Coverage
Detected in 40 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Diospyros kaki
Fragaria ananassa
Alnus glutinosa
Averrhoa carambola
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 49 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
fragaria_mandshurica_evm.model.chr6.2443 fragaria_mandshurica fragaria_mandshurica_evm.model.chr6.2443
FnilGWHABKC000000040164380.1 fragaria_nilgerrensis FnilGWHABKC000000040164380.1
fragaria_nubicola_evm.model.ctg114.175 fragaria_nubicola fragaria_nubicola_evm.model.ctg114.175
Fves02G0032420.1 fragaria_vesca Fves02G0032420.1
fragaria_x_ananassa_maker-Fvb2-1-augustus-gene-173.14-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb2-1-augustus-gene-173.14-mRNA-1
fragaria_x_ananassa_maker-Fvb2-2-augustus-gene-41.44-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb2-2-augustus-gene-41.44-mRNA-1
fragaria_x_ananassa_maker-Fvb2-4-augustus-gene-194.38-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb2-4-augustus-gene-194.38-mRNA-1
fragaria_x_ananassa_maker-Fvb6-1-snap-gene-187.35-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb6-1-snap-gene-187.35-mRNA-1
FexcContig17920071850.1 fraxinus_excelsior FexcContig17920071850.1
FexcContig30030158660.1 fraxinus_excelsior FexcContig30030158660.1
FexcContig30030158660.2 fraxinus_excelsior FexcContig30030158660.2
FexcContig30030158660.3 fraxinus_excelsior FexcContig30030158660.3
fraxinus_pennsylvanica_Fp_g20109 fraxinus_pennsylvanica fraxinus_pennsylvanica_Fp_g20109
fraxinus_pennsylvanica_Fp_g37967 fraxinus_pennsylvanica fraxinus_pennsylvanica_Fp_g37967
fraxinus_pennsylvanica_Fp_g45766 fraxinus_pennsylvanica fraxinus_pennsylvanica_Fp_g45766
Fhygscaffold_170111000 funaria_hygrometrica Fhygscaffold_170111000
Fhygscaffold_260270170 funaria_hygrometrica Fhygscaffold_260270170
GelaGWHAAEX000000130024080.1 gastrodia_elata GelaGWHAAEX000000130024080.1
GelaGWHAAEX000000160030610.1 gastrodia_elata GelaGWHAAEX000000160030610.1
Gtri03G0008040 gilleni_trifoliata Gtri03G0008040
Gtri07G0010160 gilleni_trifoliata Gtri07G0010160
Gt00009536 gillenia_trifoliata Gt00009536
Gt00038580 gillenia_trifoliata Gt00038580
Gbil01G0030920.1 ginkgo_biloba Gbil01G0030920.1
glebionis_coronaria_Gcor.h2tg001071l.g381.t1 glebionis_coronaria glebionis_coronaria_Gcor.h2tg001071l.g381.t1
Gmax14G0015130.1 glycine_max Gmax14G0015130.1
Gsoj03G0007260.1 glycine_soja Gsoj03G0007260.1
Gsoj05G0009200.1 glycine_soja Gsoj05G0009200.1
Gsoj14G0016610.1 glycine_soja Gsoj14G0016610.1
Gsoj14G0016610.2 glycine_soja Gsoj14G0016610.2