PlantSME Plant secondary metabolism enzyme database
TYDC_DDC

TYDC_DDC

Atlas summary family TYDC_DDC.

Lineage Coverage
Detected in 40 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Diospyros kaki
Fragaria ananassa
Alnus glutinosa
Averrhoa carambola
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 49 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
FanaFAN_r2.3ch3X1b0823580 fragaria_ananassa FanaFAN_r2.3ch3X1b0823580
FanaFAN_r2.3ch3X1b0832880 fragaria_ananassa FanaFAN_r2.3ch3X1b0832880
FanaFAN_r2.3ch3X2b0879360 fragaria_ananassa FanaFAN_r2.3ch3X2b0879360
FanaFAN_r2.3ch3X2b0879370 fragaria_ananassa FanaFAN_r2.3ch3X2b0879370
fragaria_chiloensis_augustus_masked-2C-processed-gene-171.6-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-2C-processed-gene-171.6-mRNA-1
fragaria_chiloensis_augustus_masked-2C-processed-gene-171.7-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-2C-processed-gene-171.7-mRNA-1
fragaria_chiloensis_augustus_masked-3A-processed-gene-264.0-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-3A-processed-gene-264.0-mRNA-1
fragaria_chiloensis_augustus_masked-3A-processed-gene-264.1-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-3A-processed-gene-264.1-mRNA-1
fragaria_chiloensis_augustus_masked-3A-processed-gene-264.7-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-3A-processed-gene-264.7-mRNA-1
fragaria_chiloensis_augustus_masked-3C-processed-gene-55.89-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-3C-processed-gene-55.89-mRNA-1
fragaria_chiloensis_augustus_masked-3C-processed-gene-55.90-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-3C-processed-gene-55.90-mRNA-1
fragaria_chiloensis_augustus_masked-3C-processed-gene-56.3-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-3C-processed-gene-56.3-mRNA-1
fragaria_chiloensis_augustus_masked-3D-processed-gene-249.4-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-3D-processed-gene-249.4-mRNA-1
fragaria_chiloensis_augustus_masked-3D-processed-gene-249.5-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-3D-processed-gene-249.5-mRNA-1
fragaria_chiloensis_augustus_masked-3D-processed-gene-249.6-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-3D-processed-gene-249.6-mRNA-1
fragaria_chiloensis_maker-2A-augustus-gene-170.5-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-2A-augustus-gene-170.5-mRNA-1
fragaria_chiloensis_maker-2B-augustus-gene-115.6-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-2B-augustus-gene-115.6-mRNA-1
fragaria_chiloensis_maker-2C-augustus-gene-183.57-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-2C-augustus-gene-183.57-mRNA-1
fragaria_chiloensis_maker-2D-augustus-gene-96.0-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-2D-augustus-gene-96.0-mRNA-1
fragaria_chiloensis_maker-3A-augustus-gene-264.19-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-3A-augustus-gene-264.19-mRNA-1
fragaria_chiloensis_maker-3A-exonerate_protein2genome-gene-264.51-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-3A-exonerate_protein2genome-gene-264.51-mRNA-1
fragaria_chiloensis_maker-3B-exonerate_protein2genome-gene-47.56-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-3B-exonerate_protein2genome-gene-47.56-mRNA-1
fragaria_chiloensis_maker-3D-augustus-gene-250.89-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-3D-augustus-gene-250.89-mRNA-1
fragaria_chiloensis_maker-3D-exonerate_protein2genome-gene-250.10-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-3D-exonerate_protein2genome-gene-250.10-mRNA-1
fragaria_chiloensis_maker-3D-exonerate_protein2genome-gene-250.11-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-3D-exonerate_protein2genome-gene-250.11-mRNA-1
fragaria_iinumae_evm.model.scaf_4.2399 fragaria_iinumae fragaria_iinumae_evm.model.scaf_4.2399
fragaria_iinumae_evm.model.scaf_4.2528 fragaria_iinumae fragaria_iinumae_evm.model.scaf_4.2528
fragaria_iinumae_evm.model.scaf_93.848 fragaria_iinumae fragaria_iinumae_evm.model.scaf_93.848
fragaria_iinumae_evm.model.scaf_93.849 fragaria_iinumae fragaria_iinumae_evm.model.scaf_93.849
fragaria_mandshurica_evm.model.chr2.1089 fragaria_mandshurica fragaria_mandshurica_evm.model.chr2.1089