PlantSME Plant secondary metabolism enzyme database

AtriAmTr_v1.0_scaffold000070028720.1 amborella_trichopoda

Protein ID: AtriAmTr_v1.0_scaffold000070028720.1
Species：Amborella trichopoda (amborella_trichopoda)
6
Assignments
Phylogenetic Position
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Annotation Path
Each assignment is summarized in the order Pathway -> Module -> Family -> Library -> Method.
Pathway Phenylpropanoid pathway
→
Module Phenylpropanoid portable pathway
→
Family C4H/CYP73A
→
Library Phenylpropanoid Official Library
→
Method hmm
Pathway Rosmarinic acid pathway
→
Module Rosmarinic acid portable pathway
→
Family C4H
→
Library Rosmarinic acid Official Library
→
Method hmm
Pathway Flavonoid pathway
→
Module Flavonoid portable pathway
→
Family FNS
→
Library Flavonoid Official Library
→
Method blast+hmm_conflict
Pathway Alkaloid pathway
→
Module Alkaloid portable pathway
→
Family G8O/G8H
→
Library Alkaloid Official Library
→
Method blast+hmm_conflict
Pathway Steroid pathway
→
Module Steroid portable pathway
→
Family CYP51G1
→
Library Steroid Official Library
→
Method blast+hmm_conflict
Pathway Terpenoid pathway
→
Module Terpenoid portable pathway
→
Family CYP76
→
Library Terpenoid Official Library
→
Method hmm
Annotation Details
Pathway Module Family Library Method
Phenylpropanoid pathway Phenylpropanoid portable pathway C4H/CYP73A Phenylpropanoid Official Library hmm
Rosmarinic acid pathway Rosmarinic acid portable pathway C4H Rosmarinic acid Official Library hmm
Flavonoid pathway Flavonoid portable pathway FNS Flavonoid Official Library blast+hmm_conflict
Alkaloid pathway Alkaloid portable pathway G8O/G8H Alkaloid Official Library blast+hmm_conflict
Steroid pathway Steroid portable pathway CYP51G1 Steroid Official Library blast+hmm_conflict
Terpenoid pathway Terpenoid portable pathway CYP76 Terpenoid Official Library hmm
Protein Sequence
MSDLAAFTVRSIPGSYGLPLIGNLMDRMDYFWLEGRDKFFQNRMAKYQSTVFRANVPASAPLFGGSDPRVIAIVDSAAFT
TLFDISLVEKKDVLVGDYLPSLDYTGGMRVLAYLDPSEPQHSSIKSFLLDNLRRSAKTWVPDLQSSLEPLWSTLEKDVQE
KGSAGVLLPLQKFLFSFLSKVLLGADPAVDPEIAKNGHFIIDKWLAPQLVPTVGTGGLIPYPLEELLLHSFPLPFAFVRG
GYQKLYDFILNHAKDVLSIAINEYGLTEAQATHNLLYTLGFNAFGGFSIFLPSLISYIGKDPRLQERLRTEVRDVMNTHE
GVSFNAVSEMELLSSTVYEALRINPPVAFQYGRARRDFILKSHDCSYGVQAGELLCGFQPLAMRDPKVFEAPEEFRADRF
IKERGGEGLIQYVYWSNGPQTATPSVENKQCVAKDYVMATTRLILAELFMRYDSFQLDNDSSSTITFLKRRS*