PlantSME Plant secondary metabolism enzyme database

Alyrscaffold_30098690.1 arabidopsis_lyrata

Protein ID: Alyrscaffold_30098690.1
Record level: protein/isoform record
Species：Arabidopsis lyrata (arabidopsis_lyrata)
6
Assignments
Phylogenetic Position
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Annotation Path
Each assignment is summarized in the order Pathway -> Module -> Family -> Library -> Method.
Pathway Steroid pathway
→
Module Steroid portable pathway
→
Family CYP90D1
→
Library Steroid Official Library
→
Method blast+hmm
Pathway Rosmarinic acid pathway
→
Module Rosmarinic acid portable pathway
→
Family C4H
→
Library Rosmarinic acid Official Library
→
Method hmm
Pathway Phenylpropanoid pathway
→
Module Phenylpropanoid portable pathway
→
Family C3'H/CYP98A
→
Library Phenylpropanoid Official Library
→
Method blast+hmm
Pathway Flavonoid pathway
→
Module Flavonoid portable pathway
→
Family FNS
→
Library Flavonoid Official Library
→
Method blast+hmm_conflict
Pathway Alkaloid pathway
→
Module Alkaloid portable pathway
→
Family SLS
→
Library Alkaloid Official Library
→
Method blast+hmm_conflict
Pathway Terpenoid pathway
→
Module Terpenoid portable pathway
→
Family CYP76
→
Library Terpenoid Official Library
→
Method blast+hmm
Annotation Details
Pathway Module Family Library Method
Steroid pathway Steroid portable pathway CYP90D1 Steroid Official Library blast+hmm
Rosmarinic acid pathway Rosmarinic acid portable pathway C4H Rosmarinic acid Official Library hmm
Phenylpropanoid pathway Phenylpropanoid portable pathway C3'H/CYP98A Phenylpropanoid Official Library blast+hmm
Flavonoid pathway Flavonoid portable pathway FNS Flavonoid Official Library blast+hmm_conflict
Alkaloid pathway Alkaloid portable pathway SLS Alkaloid Official Library blast+hmm_conflict
Terpenoid pathway Terpenoid portable pathway CYP76 Terpenoid Official Library blast+hmm
Protein Sequence
MDTSSSLLLFSFFFFIIIVIFNKINGLRSSPATKKLKDYHSHIFGTATIVSTDAEVNRAVLQSDSTAFVPFYPKTVRELM
GKSSILLINGSLHRRFHGLVGSFLKSPLLKAQIVRDMHRFLSESMDLWSEDQPVLLQDVSKTVAFKVLAKALISVEKGEE
LEELKKEFENFISGLMSLPINFPGTQLHRSLQAKKNMVKQVERIIEGKIRSAKNKEEDGTVIAKDVVDVLLKDSSEYLTH
NLIANNMIDMMIPGHDSVPVLITLAVKFLSDSPAALNLLTEENMKLKSLKELTGEPLYWNDYLSLPFTQKVITETLRMGN
VIIGVMRKAMKDVEIKGYVIPKGWCFLAYFRSVHLDKLYYDSPYKFNPWRWQERDMNTSSFSPFGGGQRLCPGLDLARLE
ASIFLHHLVTRFRLKKSHECFESGK*