PlantSME Plant secondary metabolism enzyme database

Bca_GomC02g48840.mRNA1 brassica_carinata

Protein ID: Bca_GomC02g48840.mRNA1
Record level: protein/isoform record
Species：Brassica carinata (brassica_carinata)
2
Assignments
Phylogenetic Position
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Annotation Path
Each assignment is summarized in the order Pathway -> Module -> Family -> Library -> Method.
Pathway Steroid pathway
→
Module Steroid portable pathway
→
Family DWF5
→
Library Steroid Official Library
→
Method blast+hmm_conflict
Pathway Alkaloid pathway
→
Module Alkaloid portable pathway
→
Family CNMT
→
Library Alkaloid Official Library
→
Method hmm
Annotation Details
Pathway Module Family Library Method
Steroid pathway Steroid portable pathway DWF5 Steroid Official Library blast+hmm_conflict
Alkaloid pathway Alkaloid portable pathway CNMT Alkaloid Official Library hmm
Protein Sequence
MTSPWFKSLSSVFGLKPRIKSLLLLILGLVALVTILAPLSSTSYDASTSSTLVPNIYSNYKRIKEQAAVDYLDLRSLSLG
TTLKEFPLCGKERESYVPCYNSKENLLAGLQEGDVLDRHCEFEREKERCVVRPPRDYKIPLRWPLGRDIIWNGNVKITKD
QFLSSGTVTTRLMLLEENQIAFHSEDGLIFDGVKDYARQIAEMIGLGSDTEFAQAGVRTVLDIGCGFGSFGAHVVSLNLM
PICIAEYEATGSQVQLALERGLPAMIGSFFSKQLPYPALSFDMVHCAQCGITWDIKDAMLLLEVDRVLKPGGYFVLTSPT
NKAQGNSPDTKKTSITTRVNELSKKICWSPIGQQDETILWQKTADSNCYSSRSQDSIPLCKDGDSAPYYHPLVPCISGTT
SKRWIPIQNRTTSAELEIHGLKPEEFLEDTELWRTALKNYWSLLTPLIFSDHPKRPGDEDPLPPFNMIRNVMDMNARFGN
LNSALLDQEKSAWVMNVVPVNARNTLPLILDRGFAGVLHNWCEPFPTYPRTYDMLHANELLTHVSSERCSLMDLLLEMDR
VLRPEGWVVISDKVGVIEMARALATRVRWEARVIDLQDVTTTRCLLTVICSKQIQTMPPAIAL