Bca_GomC08g06540.mRNA1 brassica_carinata
Protein ID: Bca_GomC08g06540.mRNA1
Record level: protein/isoform record
3
Assignments
Phylogenetic Position
Annotation Path
Each assignment is summarized in the order Pathway -> Module -> Family -> Library -> Method.
Pathway
Alkaloid pathway
→
Module
Alkaloid portable pathway
→
Family
TRI/TRII
→
Library
Alkaloid Official Library
→
Method
blast+hmm_conflict
Pathway
Phenylpropanoid pathway
→
→
Family
CAD
→
Library
Phenylpropanoid Official Library
→
Method
blast
Pathway
Steroid pathway
→
Module
Steroid portable pathway
→
Family
HYD1
→
Library
Steroid Official Library
→
Method
hmm
Annotation Details
| Pathway | Module | Family | Library | Method |
|---|---|---|---|---|
| Alkaloid pathway | Alkaloid portable pathway | TRI/TRII | Alkaloid Official Library | blast+hmm_conflict |
| Phenylpropanoid pathway | Phenylpropanoid portable pathway | CAD | Phenylpropanoid Official Library | blast |
| Steroid pathway | Steroid portable pathway | HYD1 | Steroid Official Library | hmm |
Protein Sequence
MAMLRRTVFTSSLRSHPLFIRHFIPSYQSLPFPTTAVIIAGRHYLRRLSTPTDTTIRCISSQTASDLVSKHPPFVRIYKD GRVERLAGTETIPASLTPQNGVVSKDAVYSPEHNLSVRGVVLFTRSLAHLKRQGIRINVLCPEFIQTDLAEAIGASFLQS IGGYMPMDMLIKGAFELITDESKAGACLWISNRRGLEYWPTPMEQAKYLVGSGSRKRTSFKVTSTIELPQSFEKIIVHAL SHNFRNATRIVRTPLQLPIRPHQVLLKIIYAGVNASDVNFSSGRYFTGGSPKLPFDAGFEGVGLIAAVGESVKNLEVGTP AAVMTFGAYAEYMIVSSKHVLPVPRPDPEVVAMLTSGLTALTALEKAGQMKSDETVLVTAAAGGTGQFAVQLAKLAGNKV IATCGGSEKAKLLKELGVLKKEFPKGVDIIYESVGGKMFDLCLNALAVYGRLIVIGMISQYQGEKGWQPSNYPGLCEKIL AKSQTVAGFFLVQYSQLWKQNLDKLFNLYSLGKLKVVYKLFNLYSLGKLKVGIDQKKFIGLNTVSDAVEYLHSGKSTGKV VVCMDPTFEQTTSRL