PlantSME Plant secondary metabolism enzyme database

Andreaea wilsonii (andreaea_wilsonii)

Imported from atlas release summary for Andreaea wilsonii.

413
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Alkaloid pathway 25.18% Phenylpropanoid pathway 24.94% Terpenoid pathway 22.76% Rosmarinic acid pathway 10.41% Flavonoid pathway 8.96% Steroid pathway 7.75%
Family Distribution
4CL 6.23% NMT 6.14% BAHD 6.04% C4H 5.57% POD 5.29% C3'H/CYP98A 5.1% CYP76 3.97% IFS 3.12%
Other Families 58.55%
More Families (95)
STR 28 2.64% T3O 28 2.64% IFR 23 2.17% PYKS 22 2.08% GS 21 1.98% PAL 21 1.98% DWF4/CYP90B1 20 1.89% F3H 19 1.79% F3'H/CYP75B 19 1.79% CSE 18 1.7% TRI/TRII 17 1.61% BR6OX2/CYP85A2 16 1.51% CYP71 16 1.51% SMT1/SMT2/SMT3 15 1.42% CAD 13 1.23% SGD 12 1.13% UGT 11 1.04% CODM/T6ODM 10 0.94% T16H 10 0.94% UFGT 10 0.94% CAS 10 0.94% H6H 9 0.85% SLS 9 0.85% CHS 9 0.85% 7DLGT 8 0.76% CNMT 8 0.76% CYP90D1 8 0.76% IO 7 0.66% RAS 7 0.66% 8HGO 6 0.57% G8O/G8H 6 0.57% COR 6 0.57% MPO 6 0.57% ADC 6 0.57% COMT 6 0.57% HCT 6 0.57% GGPPS 6 0.57% 7DLH 5 0.47% ANR 5 0.47% F3'5'H/CYP75A 5 0.47% FNS 5 0.47% CCR 5 0.47% ROT3/CYP90C1 5 0.47% CPD/CYP90A1 5 0.47% DET2 5 0.47% AACT 5 0.47% PMT 4 0.38% DFR 4 0.38% LAC 4 0.38% TAT 4 0.38% CPR 4 0.38% SQE 4 0.38% BR6OX1/CYP85A1 4 0.38% CYP719 3 0.28% 16OMT 3 0.28% ISY 3 0.28% ODC 3 0.28% F5H/CYP84A 3 0.28% SMO1/SMO2 3 0.28% HYD1 3 0.28% SQS/FDFT1 3 0.28% MVK 3 0.28% BBE 2 0.19% 6OMT_4OMT_SOMT 2 0.19% TDC 2 0.19% NCS 2 0.19% LAMT 2 0.19% TYDC_DDC 2 0.19% CCoAOMT 2 0.19% HPPR 2 0.19% DWF5 2 0.19% DWF1 2 0.19% HMGR 2 0.19% TPS 2 0.19% MVD 2 0.19% HMGS 2 0.19% FPPS 2 0.19% GES 1 0.09% CYP80B1 1 0.09% CYP80F1 1 0.09% ANS/LDOX 1 0.09% CHI 1 0.09% DWF7 1 0.09% FK 1 0.09% CPI1 1 0.09% CYP51G1 1 0.09% MDS/IspF 1 0.09% MCT/IspD 1 0.09% CMK/IspE 1 0.09% DXR 1 0.09% PMK 1 0.09% HDS/IspG 1 0.09% HDR/IspH 1 0.09% DXS 1 0.09% IDI 1 0.09%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Alkaloid pathway 104 19 NMT (18) View species results
Phenylpropanoid pathway 103 10 POD (53) View species results
Terpenoid pathway 94 19 BAHD (43) View species results
Rosmarinic acid pathway 43 7 C4H (13) View species results
Flavonoid pathway 37 7 4CL (11) View species results
Steroid pathway 32 12 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 360 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 77 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
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Gene Pathway Family Confidence Status Best Target
Awil10080001930 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
Awil10290004660 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Awil10290004820 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Awil12060020430 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
Awil12190021680 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Awil12860029080 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Awil13790033920 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Awil14570036470 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Awil1640041860 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Awil1700043720 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Awil1700043820 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Awil2390061520 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Awil2390061750 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Awil2540063920 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
Awil2620065200 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
Awil2680066220 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Awil3010071590 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
Awil3261440079470 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Awil3380091190 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
Awil4520113940 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Awil4700115740 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Awil5430121810 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Awil5550122290 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Awil7960139730 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Awil8330143720 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Awil8400144140 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Awil8620146390 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
Awil9010150280 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR