PlantSME Plant secondary metabolism enzyme database

Andreaea wilsonii (andreaea_wilsonii)

Imported from atlas release summary for Andreaea wilsonii.

413
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Alkaloid pathway 25.18% Phenylpropanoid pathway 24.94% Terpenoid pathway 22.76% Rosmarinic acid pathway 10.41% Flavonoid pathway 8.96% Steroid pathway 7.75%
Family Distribution
4CL 6.23% NMT 6.14% BAHD 6.04% C4H 5.57% POD 5.29% C3'H/CYP98A 5.1% CYP76 3.97% IFS 3.12%
Other Families 58.55%
More Families (95)
STR 28 2.64% T3O 28 2.64% IFR 23 2.17% PYKS 22 2.08% GS 21 1.98% PAL 21 1.98% DWF4/CYP90B1 20 1.89% F3H 19 1.79% F3'H/CYP75B 19 1.79% CSE 18 1.7% TRI/TRII 17 1.61% BR6OX2/CYP85A2 16 1.51% CYP71 16 1.51% SMT1/SMT2/SMT3 15 1.42% CAD 13 1.23% SGD 12 1.13% UGT 11 1.04% CODM/T6ODM 10 0.94% T16H 10 0.94% UFGT 10 0.94% CAS 10 0.94% H6H 9 0.85% SLS 9 0.85% CHS 9 0.85% 7DLGT 8 0.76% CNMT 8 0.76% CYP90D1 8 0.76% IO 7 0.66% RAS 7 0.66% 8HGO 6 0.57% G8O/G8H 6 0.57% COR 6 0.57% MPO 6 0.57% ADC 6 0.57% COMT 6 0.57% HCT 6 0.57% GGPPS 6 0.57% 7DLH 5 0.47% ANR 5 0.47% F3'5'H/CYP75A 5 0.47% FNS 5 0.47% CCR 5 0.47% ROT3/CYP90C1 5 0.47% CPD/CYP90A1 5 0.47% DET2 5 0.47% AACT 5 0.47% PMT 4 0.38% DFR 4 0.38% LAC 4 0.38% TAT 4 0.38% CPR 4 0.38% SQE 4 0.38% BR6OX1/CYP85A1 4 0.38% CYP719 3 0.28% 16OMT 3 0.28% ISY 3 0.28% ODC 3 0.28% F5H/CYP84A 3 0.28% SMO1/SMO2 3 0.28% HYD1 3 0.28% SQS/FDFT1 3 0.28% MVK 3 0.28% BBE 2 0.19% 6OMT_4OMT_SOMT 2 0.19% TDC 2 0.19% NCS 2 0.19% LAMT 2 0.19% TYDC_DDC 2 0.19% CCoAOMT 2 0.19% HPPR 2 0.19% DWF5 2 0.19% DWF1 2 0.19% HMGR 2 0.19% TPS 2 0.19% MVD 2 0.19% HMGS 2 0.19% FPPS 2 0.19% GES 1 0.09% CYP80B1 1 0.09% CYP80F1 1 0.09% ANS/LDOX 1 0.09% CHI 1 0.09% DWF7 1 0.09% FK 1 0.09% CPI1 1 0.09% CYP51G1 1 0.09% MDS/IspF 1 0.09% MCT/IspD 1 0.09% CMK/IspE 1 0.09% DXR 1 0.09% PMK 1 0.09% HDS/IspG 1 0.09% HDR/IspH 1 0.09% DXS 1 0.09% IDI 1 0.09%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Alkaloid pathway 104 19 NMT (18) View species results
Phenylpropanoid pathway 103 10 POD (53) View species results
Terpenoid pathway 94 19 BAHD (43) View species results
Rosmarinic acid pathway 43 7 C4H (13) View species results
Flavonoid pathway 37 7 4CL (11) View species results
Steroid pathway 32 12 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 360 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 77 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Gene Pathway Family Confidence Status Best Target
Awil11300013590 Alkaloid TRI/TRII medium pass TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
Awil13160030450 Alkaloid TRI/TRII medium pass TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
Awil14570036350 Alkaloid TRI/TRII medium pass TRI_TRII__00005__sp_P50162_TRN1_DATST
Awil1770048920 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Awil2987500070270 Alkaloid TRI/TRII low borderline TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
Awil3220077640 Alkaloid TRI/TRII low borderline TRI_TRII__00005__sp_P50162_TRN1_DATST
Awil3283850080650 Alkaloid TRI/TRII low borderline TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
Awil3585560095040 Alkaloid TRI/TRII low borderline TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH
Awil3585570095050 Alkaloid TRI/TRII low borderline TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH
Awil3623170102480 Alkaloid TRI/TRII medium pass TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
Awil3623180102540 Alkaloid TRI/TRII medium pass TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
Awil4140111040 Alkaloid TRI/TRII low borderline TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
Awil4620115510 Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
Awil7250133080 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Awil7250133120 Alkaloid TRI/TRII low borderline TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Awil8030140620 Alkaloid TRI/TRII low borderline TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
Awil9010150360 Alkaloid TRI/TRII medium pass TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH