PlantSME Plant secondary metabolism enzyme database

Andreaeobryum macrosporum (andreaeobryum_macrosporum)

Imported from atlas release summary for Andreaeobryum macrosporum.

453
Candidate Genes
98
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 25.61% Terpenoid pathway 22.74% Alkaloid pathway 19.87% Rosmarinic acid pathway 13.47% Flavonoid pathway 11.7% Steroid pathway 6.62%
Family Distribution
BAHD 6.8% 4CL 6.41% PAL 5.24% C3'H/CYP98A 5.05% C4H 4.95% NMT 4.85% POD 4.85% CYP76 3.88%
Other Families 57.96%
More Families (90)
IFS 36 3.5% T3O 34 3.3% STR 26 2.52% IFR 25 2.43% DWF4/CYP90B1 25 2.43% BR6OX2/CYP85A2 22 2.14% GS 21 2.04% F3H 18 1.75% PYKS 16 1.55% SMT1/SMT2/SMT3 15 1.46% F3'H/CYP75B 14 1.36% SGD 13 1.26% CYP71 13 1.26% UGT 13 1.26% COMT 12 1.17% TRI/TRII 11 1.07% 7DLGT 11 1.07% CODM/T6ODM 10 0.97% UFGT 10 0.97% HCT 10 0.97% CAD 10 0.97% RAS 10 0.97% LAC 9 0.87% CSE 9 0.87% F3'5'H/CYP75A 8 0.78% CAS 8 0.78% H6H 7 0.68% T16H 7 0.68% CHS 7 0.68% CPD/CYP90A1 7 0.68% 16OMT 6 0.58% 8HGO 6 0.58% SLS 6 0.58% GGPPS 6 0.58% CNMT 5 0.49% COR 5 0.49% PMT 5 0.49% IO 5 0.49% DFR 5 0.49% CPR 5 0.49% ADC 4 0.39% G8O/G8H 4 0.39% FNS 4 0.39% DWF5 4 0.39% DXS 4 0.39% AACT 4 0.39% MVK 4 0.39% CYP719 3 0.29% CCR 3 0.29% F5H/CYP84A 3 0.29% TAT 3 0.29% SMO1/SMO2 3 0.29% SQE 3 0.29% SQS/FDFT1 3 0.29% CMK/IspE 3 0.29% NCS 2 0.19% CYP80B1 2 0.19% 6OMT_4OMT_SOMT 2 0.19% MPO 2 0.19% BBE 2 0.19% CHI 2 0.19% CCoAOMT 2 0.19% HPPR 2 0.19% CPI1 2 0.19% ROT3/CYP90C1 2 0.19% DET2 2 0.19% FK 2 0.19% CYP51G1 2 0.19% DWF1 2 0.19% BR6OX1/CYP85A1 2 0.19% DXR 2 0.19% PMK 2 0.19% MCT/IspD 2 0.19% MVD 2 0.19% 7DLH 1 0.1% TDC 1 0.1% GES 1 0.1% TYDC_DDC 1 0.1% ANS/LDOX 1 0.1% ANR 1 0.1% CYP90D1 1 0.1% DWF7 1 0.1% HYD1 1 0.1% HDS/IspG 1 0.1% HMGR 1 0.1% HDR/IspH 1 0.1% MDS/IspF 1 0.1% IDI 1 0.1% TPS 1 0.1% FPPS 1 0.1%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 116 10 POD (48) View species results
Terpenoid pathway 103 18 BAHD (50) View species results
Alkaloid pathway 90 16 NMT (20) View species results
Rosmarinic acid pathway 61 7 PAL (17) View species results
Flavonoid pathway 53 7 PAL (17) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 340 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 90 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
Amac1023520001400 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Amac1247670010610 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Amac1458740028370 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Amac1551270047770 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Amac1606190060750 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Amac1614920065460 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Amac1663740092430 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Amac1673150103010 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Amac1688320131570 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH