PlantSME Plant secondary metabolism enzyme database

Andreaeobryum macrosporum (andreaeobryum_macrosporum)

Imported from atlas release summary for Andreaeobryum macrosporum.

453
Candidate Genes
98
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 25.61% Terpenoid pathway 22.74% Alkaloid pathway 19.87% Rosmarinic acid pathway 13.47% Flavonoid pathway 11.7% Steroid pathway 6.62%
Family Distribution
BAHD 6.8% 4CL 6.41% PAL 5.24% C3'H/CYP98A 5.05% C4H 4.95% NMT 4.85% POD 4.85% CYP76 3.88%
Other Families 57.96%
More Families (90)
IFS 36 3.5% T3O 34 3.3% STR 26 2.52% IFR 25 2.43% DWF4/CYP90B1 25 2.43% BR6OX2/CYP85A2 22 2.14% GS 21 2.04% F3H 18 1.75% PYKS 16 1.55% SMT1/SMT2/SMT3 15 1.46% F3'H/CYP75B 14 1.36% SGD 13 1.26% CYP71 13 1.26% UGT 13 1.26% COMT 12 1.17% TRI/TRII 11 1.07% 7DLGT 11 1.07% CODM/T6ODM 10 0.97% UFGT 10 0.97% HCT 10 0.97% CAD 10 0.97% RAS 10 0.97% LAC 9 0.87% CSE 9 0.87% F3'5'H/CYP75A 8 0.78% CAS 8 0.78% H6H 7 0.68% T16H 7 0.68% CHS 7 0.68% CPD/CYP90A1 7 0.68% 16OMT 6 0.58% 8HGO 6 0.58% SLS 6 0.58% GGPPS 6 0.58% CNMT 5 0.49% COR 5 0.49% PMT 5 0.49% IO 5 0.49% DFR 5 0.49% CPR 5 0.49% ADC 4 0.39% G8O/G8H 4 0.39% FNS 4 0.39% DWF5 4 0.39% DXS 4 0.39% AACT 4 0.39% MVK 4 0.39% CYP719 3 0.29% CCR 3 0.29% F5H/CYP84A 3 0.29% TAT 3 0.29% SMO1/SMO2 3 0.29% SQE 3 0.29% SQS/FDFT1 3 0.29% CMK/IspE 3 0.29% NCS 2 0.19% CYP80B1 2 0.19% 6OMT_4OMT_SOMT 2 0.19% MPO 2 0.19% BBE 2 0.19% CHI 2 0.19% CCoAOMT 2 0.19% HPPR 2 0.19% CPI1 2 0.19% ROT3/CYP90C1 2 0.19% DET2 2 0.19% FK 2 0.19% CYP51G1 2 0.19% DWF1 2 0.19% BR6OX1/CYP85A1 2 0.19% DXR 2 0.19% PMK 2 0.19% MCT/IspD 2 0.19% MVD 2 0.19% 7DLH 1 0.1% TDC 1 0.1% GES 1 0.1% TYDC_DDC 1 0.1% ANS/LDOX 1 0.1% ANR 1 0.1% CYP90D1 1 0.1% DWF7 1 0.1% HYD1 1 0.1% HDS/IspG 1 0.1% HMGR 1 0.1% HDR/IspH 1 0.1% MDS/IspF 1 0.1% IDI 1 0.1% TPS 1 0.1% FPPS 1 0.1%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 116 10 POD (48) View species results
Terpenoid pathway 103 18 BAHD (50) View species results
Alkaloid pathway 90 16 NMT (20) View species results
Rosmarinic acid pathway 61 7 PAL (17) View species results
Flavonoid pathway 53 7 PAL (17) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 340 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 90 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Gene Pathway Family Confidence Status Best Target
Amac1044080002240 Alkaloid TRI/TRII low borderline TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Amac1248820011440 Alkaloid TRI/TRII medium pass TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
Amac1270640015780 Alkaloid TRI/TRII low borderline TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
Amac1383760017940 Alkaloid TRI/TRII low borderline TRI_TRII__00005__sp_P50162_TRN1_DATST
Amac1529050039320 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Amac1531900040660 Alkaloid TRI/TRII medium pass TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
Amac1598650059030 Alkaloid TRI/TRII low borderline TRI_TRII__00005__sp_P50162_TRN1_DATST
Amac1639570075470 Alkaloid TRI/TRII low borderline TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
Amac1670430099590 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Amac1682470118590 Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
Amac1685350125540 Alkaloid TRI/TRII low borderline TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH