PlantSME Plant secondary metabolism enzyme database

Aristolochia contorta (aristolochia_contorta)

Imported from atlas release summary for Aristolochia contorta.

1141
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Current group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.15% Alkaloid pathway 23.75% Phenylpropanoid pathway 20.86% Flavonoid pathway 10.43% Rosmarinic acid pathway 9.38% Steroid pathway 5.43%
Family Distribution
C4H 8.02% C3'H/CYP98A 7.71% CYP76 5.41% IFS 4.35% BAHD 4.23% T3O 3.95% 4CL 3.17% DWF4/CYP90B1 2.99%
Other Families 60.17%
More Families (97)
POD 95 2.95% BR6OX2/CYP85A2 93 2.89% F3'H/CYP75B 88 2.74% UGT 76 2.36% 7DLGT 75 2.33% UFGT 75 2.33% F3H 72 2.24% CAD 70 2.18% NMT 59 1.83% TPS 53 1.65% CAS 51 1.59% G8O/G8H 50 1.55% GES 49 1.52% CYP71 47 1.46% STR 41 1.27% CODM/T6ODM 41 1.27% NCS 40 1.24% H6H 32 1.0% TRI/TRII 32 1.0% CSE 31 0.96% CYP90D1 30 0.93% GS 29 0.9% SGD 29 0.9% F3'5'H/CYP75A 28 0.87% SMT1/SMT2/SMT3 27 0.84% HCT 26 0.81% ANR 25 0.78% IFR 25 0.78% IO 24 0.75% LAC 23 0.72% T16H 22 0.68% COMT 21 0.65% CCR 21 0.65% CNMT 20 0.62% SLS 20 0.62% PYKS 20 0.62% 8HGO 18 0.56% FNS 18 0.56% PMT 17 0.53% LAMT 17 0.53% 16OMT 16 0.5% COR 16 0.5% RAS 16 0.5% 7DLH 15 0.47% BBE 14 0.44% CPD/CYP90A1 14 0.44% TAT 13 0.4% CYP51G1 13 0.4% PAL 12 0.37% CYP719 10 0.31% CYP80B1 10 0.31% F5H/CYP84A 10 0.31% CCoAOMT 8 0.25% ROT3/CYP90C1 8 0.25% ISY 7 0.22% ODC 6 0.19% XMT_MXMT_DXMT 6 0.19% TYDC_DDC 6 0.19% DFR 6 0.19% SQS/FDFT1 6 0.19% BR6OX1/CYP85A1 6 0.19% GGPPS 6 0.19% MPO 5 0.16% ANS/LDOX 5 0.16% CHI 5 0.16% CPR 4 0.12% HPPR 4 0.12% DXS 4 0.12% AACT 4 0.12% MVK 4 0.12% CHS 3 0.09% DET2 3 0.09% PMK 3 0.09% MVD 3 0.09% MCT/IspD 3 0.09% FPPS 3 0.09% CYP80F1 2 0.06% TDC 2 0.06% 6OMT_4OMT_SOMT 2 0.06% SMO1/SMO2 2 0.06% IDI 2 0.06% HDR/IspH 2 0.06% MDS/IspF 2 0.06% ADC 1 0.03% FLS 1 0.03% FK 1 0.03% DWF1 1 0.03% SQE 1 0.03% HYD1 1 0.03% CPI1 1 0.03% DWF5 1 0.03% DWF7 1 0.03% HMGS 1 0.03% HMGR 1 0.03% DXR 1 0.03% CMK/IspE 1 0.03% HDS/IspG 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 344 19 BAHD (103) View species results
Alkaloid pathway 271 21 GES (42) View species results
Phenylpropanoid pathway 238 11 POD (88) View species results
Flavonoid pathway 119 10 UFGT (70) View species results
Rosmarinic acid pathway 107 7 C4H (57) View species results
Steroid pathway 62 11 CAS (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1533 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 178 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COR
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Gene Pathway Family Confidence Status Best Target
EVM0000759.mRNA1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
EVM0001603.mRNA1 Alkaloid COR low borderline COR__00003__sp_Q9SQ68_COR13_PAPSO
EVM0002335.mRNA1 Alkaloid COR low borderline COR__00003__sp_Q9SQ68_COR13_PAPSO
EVM0003069.mRNA1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
EVM0004086.mRNA1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
EVM0004123.mRNA1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
EVM0008014.mRNA1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
EVM0009144.mRNA1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
EVM0009695.mRNA1 Alkaloid COR medium pass COR__00003__sp_Q9SQ68_COR13_PAPSO
EVM0010637.mRNA1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
EVM0011786.mRNA1 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
EVM0012857.mRNA1 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
EVM0012878.mRNA1 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
EVM0013803.mRNA1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
EVM0016116.mRNA1 Alkaloid COR low borderline COR__00002__sp_Q9SQ67_COR14_PAPSO
EVM0017395.mRNA1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO