Aristolochia contorta (aristolochia_contorta)
Imported from atlas release summary for Aristolochia contorta.
1141
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1141
Candidate Genes
C4H
8.02%
C3'H/CYP98A
7.71%
CYP76
5.41%
IFS
4.35%
BAHD
4.23%
T3O
3.95%
4CL
3.17%
DWF4/CYP90B1
2.99%
Other Families
60.17%
More Families (97)
POD
95
2.95%
BR6OX2/CYP85A2
93
2.89%
F3'H/CYP75B
88
2.74%
UGT
76
2.36%
7DLGT
75
2.33%
UFGT
75
2.33%
F3H
72
2.24%
CAD
70
2.18%
NMT
59
1.83%
TPS
53
1.65%
CAS
51
1.59%
G8O/G8H
50
1.55%
GES
49
1.52%
CYP71
47
1.46%
STR
41
1.27%
CODM/T6ODM
41
1.27%
NCS
40
1.24%
H6H
32
1.0%
TRI/TRII
32
1.0%
CSE
31
0.96%
CYP90D1
30
0.93%
GS
29
0.9%
SGD
29
0.9%
F3'5'H/CYP75A
28
0.87%
SMT1/SMT2/SMT3
27
0.84%
HCT
26
0.81%
ANR
25
0.78%
IFR
25
0.78%
IO
24
0.75%
LAC
23
0.72%
T16H
22
0.68%
COMT
21
0.65%
CCR
21
0.65%
CNMT
20
0.62%
SLS
20
0.62%
PYKS
20
0.62%
8HGO
18
0.56%
FNS
18
0.56%
PMT
17
0.53%
LAMT
17
0.53%
16OMT
16
0.5%
COR
16
0.5%
RAS
16
0.5%
7DLH
15
0.47%
BBE
14
0.44%
CPD/CYP90A1
14
0.44%
TAT
13
0.4%
CYP51G1
13
0.4%
PAL
12
0.37%
CYP719
10
0.31%
CYP80B1
10
0.31%
F5H/CYP84A
10
0.31%
CCoAOMT
8
0.25%
ROT3/CYP90C1
8
0.25%
ISY
7
0.22%
ODC
6
0.19%
XMT_MXMT_DXMT
6
0.19%
TYDC_DDC
6
0.19%
DFR
6
0.19%
SQS/FDFT1
6
0.19%
BR6OX1/CYP85A1
6
0.19%
GGPPS
6
0.19%
MPO
5
0.16%
ANS/LDOX
5
0.16%
CHI
5
0.16%
CPR
4
0.12%
HPPR
4
0.12%
DXS
4
0.12%
AACT
4
0.12%
MVK
4
0.12%
CHS
3
0.09%
DET2
3
0.09%
PMK
3
0.09%
MVD
3
0.09%
MCT/IspD
3
0.09%
FPPS
3
0.09%
CYP80F1
2
0.06%
TDC
2
0.06%
6OMT_4OMT_SOMT
2
0.06%
SMO1/SMO2
2
0.06%
IDI
2
0.06%
HDR/IspH
2
0.06%
MDS/IspF
2
0.06%
ADC
1
0.03%
FLS
1
0.03%
FK
1
0.03%
DWF1
1
0.03%
SQE
1
0.03%
HYD1
1
0.03%
CPI1
1
0.03%
DWF5
1
0.03%
DWF7
1
0.03%
HMGS
1
0.03%
HMGR
1
0.03%
DXR
1
0.03%
CMK/IspE
1
0.03%
HDS/IspG
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 344 | 19 | BAHD (103) | View species results |
| Alkaloid pathway | 271 | 21 | GES (42) | View species results |
| Phenylpropanoid pathway | 238 | 11 | POD (88) | View species results |
| Flavonoid pathway | 119 | 10 | UFGT (70) | View species results |
| Rosmarinic acid pathway | 107 | 7 | C4H (57) | View species results |
| Steroid pathway | 62 | 11 | CAS (33) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1533 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 178 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| EVM0000409.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0000672.mRNA1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| EVM0001452.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0001685.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0002159.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0002974.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0003576.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0003755.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0003845.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0003949.mRNA1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| EVM0004377.mRNA1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| EVM0004668.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0005294.mRNA1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| EVM0006471.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0006839.mRNA1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| EVM0007616.mRNA1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| EVM0007815.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0007865.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0009444.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0010468.mRNA1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0010670.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0010710.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0010732.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0011969.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0011986.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0013267.mRNA1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0013956.mRNA1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0014370.mRNA1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0014776.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0014838.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0014852.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0015087.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0015266.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0015276.mRNA1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| EVM0015282.mRNA1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| EVM0015422.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0015828.mRNA1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| EVM0016033.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0016222.mRNA1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| EVM0016845.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| EVM0017722.mRNA1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |