PlantSME Plant secondary metabolism enzyme database

Aristolochia contorta (aristolochia_contorta)

Imported from atlas release summary for Aristolochia contorta.

1389
Candidate Protein Records
1141
Pathway-Level Records
3216
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Current group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 30.15% Alkaloid pathway 23.75% Phenylpropanoid pathway 20.86% Flavonoid pathway 10.43% Rosmarinic acid pathway 9.38% Steroid pathway 5.43%
Family Distribution
C4H 8.02% C3'H/CYP98A 7.71% CYP76 5.41% IFS 4.35% BAHD 4.23% T3O 3.95% 4CL 3.17% DWF4/CYP90B1 2.99%
Other Families 60.17%
More Families (97)
POD 95 2.95% BR6OX2/CYP85A2 93 2.89% F3'H/CYP75B 88 2.74% UGT 76 2.36% 7DLGT 75 2.33% UFGT 75 2.33% F3H 72 2.24% CAD 70 2.18% NMT 59 1.83% TPS 53 1.65% CAS 51 1.59% G8O/G8H 50 1.55% GES 49 1.52% CYP71 47 1.46% STR 41 1.27% CODM/T6ODM 41 1.27% NCS 40 1.24% H6H 32 1.0% TRI/TRII 32 1.0% CSE 31 0.96% CYP90D1 30 0.93% GS 29 0.9% SGD 29 0.9% F3'5'H/CYP75A 28 0.87% SMT1/SMT2/SMT3 27 0.84% HCT 26 0.81% ANR 25 0.78% IFR 25 0.78% IO 24 0.75% LAC 23 0.72% T16H 22 0.68% COMT 21 0.65% CCR 21 0.65% CNMT 20 0.62% SLS 20 0.62% PYKS 20 0.62% 8HGO 18 0.56% FNS 18 0.56% PMT 17 0.53% LAMT 17 0.53% 16OMT 16 0.5% COR 16 0.5% RAS 16 0.5% 7DLH 15 0.47% BBE 14 0.44% CPD/CYP90A1 14 0.44% TAT 13 0.4% CYP51G1 13 0.4% PAL 12 0.37% CYP719 10 0.31% CYP80B1 10 0.31% F5H/CYP84A 10 0.31% CCoAOMT 8 0.25% ROT3/CYP90C1 8 0.25% ISY 7 0.22% ODC 6 0.19% XMT_MXMT_DXMT 6 0.19% TYDC_DDC 6 0.19% DFR 6 0.19% SQS/FDFT1 6 0.19% BR6OX1/CYP85A1 6 0.19% GGPPS 6 0.19% MPO 5 0.16% ANS/LDOX 5 0.16% CHI 5 0.16% CPR 4 0.12% HPPR 4 0.12% DXS 4 0.12% AACT 4 0.12% MVK 4 0.12% CHS 3 0.09% DET2 3 0.09% PMK 3 0.09% MVD 3 0.09% MCT/IspD 3 0.09% FPPS 3 0.09% CYP80F1 2 0.06% TDC 2 0.06% 6OMT_4OMT_SOMT 2 0.06% SMO1/SMO2 2 0.06% IDI 2 0.06% HDR/IspH 2 0.06% MDS/IspF 2 0.06% ADC 1 0.03% FLS 1 0.03% FK 1 0.03% DWF1 1 0.03% SQE 1 0.03% HYD1 1 0.03% CPI1 1 0.03% DWF5 1 0.03% DWF7 1 0.03% HMGS 1 0.03% HMGR 1 0.03% DXR 1 0.03% CMK/IspE 1 0.03% HDS/IspG 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 344 19 BAHD (103) View species results
Alkaloid pathway 271 21 GES (42) View species results
Phenylpropanoid pathway 238 11 POD (88) View species results
Flavonoid pathway 119 10 UFGT (70) View species results
Rosmarinic acid pathway 107 7 C4H (57) View species results
Steroid pathway 62 11 CAS (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1533 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 178 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status Best Target
EVM0002768.mRNA1 Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH
EVM0002900.mRNA1 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
EVM0003672.mRNA1 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
EVM0003678.mRNA1 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
EVM0003840.mRNA1 Alkaloid NMT low borderline NMT__00068__sp_Q9XI84_RBCMT_ARATH
EVM0004068.mRNA1 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
EVM0004347.mRNA1 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
EVM0004380.mRNA1 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
EVM0004597.mRNA1 Alkaloid NMT low borderline NMT__00034__sp_Q5VN06_CLF_ORYSJ
EVM0004681.mRNA1 Alkaloid NMT medium borderline NMT__00043__sp_Q8H0D2_DXMT1_COFAR
EVM0004788.mRNA1 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
EVM0005038.mRNA1 Alkaloid NMT low borderline NMT__00048__sp_Q8W595_SUVR4_ARATH
EVM0005232.mRNA1 Alkaloid NMT low borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
EVM0005524.mRNA1 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
EVM0005735.mRNA1 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
EVM0005769.mRNA1 Alkaloid NMT low borderline NMT__00065__sp_Q9SEH7_PMT2_TOBAC
EVM0005928.mRNA1 Alkaloid NMT medium pass NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
EVM0006106.mRNA1 Alkaloid NMT medium pass NMT__00060__sp_Q9MAT5_ANM10_ARATH
EVM0006116.mRNA1 Alkaloid NMT medium pass NMT__00027__sp_Q10MI4_EZ1_ORYSJ
EVM0006401.mRNA1 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
EVM0007115.mRNA1 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
EVM0007283.mRNA1 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
EVM0007680.mRNA1 Alkaloid NMT low borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
EVM0008056.mRNA1 Alkaloid NMT medium borderline NMT__00050__sp_Q944H0_PEAM2_ARATH
EVM0008627.mRNA1 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
EVM0009044.mRNA1 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
EVM0009237.mRNA1 Alkaloid NMT medium pass NMT__00034__sp_Q5VN06_CLF_ORYSJ
EVM0009584.mRNA1 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
EVM0009816.mRNA1 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
EVM0009923.mRNA1 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
EVM0009957.mRNA1 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
EVM0009978.mRNA1 Alkaloid NMT low borderline NMT__00068__sp_Q9XI84_RBCMT_ARATH
EVM0010702.mRNA1 Alkaloid NMT medium borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
EVM0011868.mRNA1 Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
EVM0012029.mRNA1 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
EVM0013002.mRNA1 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
EVM0013717.mRNA1 Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
EVM0013784.mRNA1 Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
EVM0013856.mRNA1 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
EVM0013943.mRNA1 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
EVM0014188.mRNA1 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
EVM0014653.mRNA1 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
EVM0015254.mRNA1 Alkaloid NMT medium pass NMT__00062__sp_Q9SCP7_NAMT1_ARATH
EVM0015346.mRNA1 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
EVM0015446.mRNA1 Alkaloid NMT medium pass NMT__00067__sp_Q9T0G7_SUVH9_ARATH
EVM0015972.mRNA1 Alkaloid NMT medium pass NMT__00032__sp_Q5PP37_ATXR2_ARATH
EVM0016064.mRNA1 Alkaloid NMT low borderline NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
EVM0016074.mRNA1 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
EVM0016371.mRNA1 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
EVM0016621.mRNA1 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH