PlantSME Plant secondary metabolism enzyme database

Aristolochia contorta (aristolochia_contorta)

Imported from atlas release summary for Aristolochia contorta.

1389
Candidate Protein Records
1141
Pathway-Level Records
3216
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Current group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 30.15% Alkaloid pathway 23.75% Phenylpropanoid pathway 20.86% Flavonoid pathway 10.43% Rosmarinic acid pathway 9.38% Steroid pathway 5.43%
Family Distribution
C4H 8.02% C3'H/CYP98A 7.71% CYP76 5.41% IFS 4.35% BAHD 4.23% T3O 3.95% 4CL 3.17% DWF4/CYP90B1 2.99%
Other Families 60.17%
More Families (97)
POD 95 2.95% BR6OX2/CYP85A2 93 2.89% F3'H/CYP75B 88 2.74% UGT 76 2.36% 7DLGT 75 2.33% UFGT 75 2.33% F3H 72 2.24% CAD 70 2.18% NMT 59 1.83% TPS 53 1.65% CAS 51 1.59% G8O/G8H 50 1.55% GES 49 1.52% CYP71 47 1.46% STR 41 1.27% CODM/T6ODM 41 1.27% NCS 40 1.24% H6H 32 1.0% TRI/TRII 32 1.0% CSE 31 0.96% CYP90D1 30 0.93% GS 29 0.9% SGD 29 0.9% F3'5'H/CYP75A 28 0.87% SMT1/SMT2/SMT3 27 0.84% HCT 26 0.81% ANR 25 0.78% IFR 25 0.78% IO 24 0.75% LAC 23 0.72% T16H 22 0.68% COMT 21 0.65% CCR 21 0.65% CNMT 20 0.62% SLS 20 0.62% PYKS 20 0.62% 8HGO 18 0.56% FNS 18 0.56% PMT 17 0.53% LAMT 17 0.53% 16OMT 16 0.5% COR 16 0.5% RAS 16 0.5% 7DLH 15 0.47% BBE 14 0.44% CPD/CYP90A1 14 0.44% TAT 13 0.4% CYP51G1 13 0.4% PAL 12 0.37% CYP719 10 0.31% CYP80B1 10 0.31% F5H/CYP84A 10 0.31% CCoAOMT 8 0.25% ROT3/CYP90C1 8 0.25% ISY 7 0.22% ODC 6 0.19% XMT_MXMT_DXMT 6 0.19% TYDC_DDC 6 0.19% DFR 6 0.19% SQS/FDFT1 6 0.19% BR6OX1/CYP85A1 6 0.19% GGPPS 6 0.19% MPO 5 0.16% ANS/LDOX 5 0.16% CHI 5 0.16% CPR 4 0.12% HPPR 4 0.12% DXS 4 0.12% AACT 4 0.12% MVK 4 0.12% CHS 3 0.09% DET2 3 0.09% PMK 3 0.09% MVD 3 0.09% MCT/IspD 3 0.09% FPPS 3 0.09% CYP80F1 2 0.06% TDC 2 0.06% 6OMT_4OMT_SOMT 2 0.06% SMO1/SMO2 2 0.06% IDI 2 0.06% HDR/IspH 2 0.06% MDS/IspF 2 0.06% ADC 1 0.03% FLS 1 0.03% FK 1 0.03% DWF1 1 0.03% SQE 1 0.03% HYD1 1 0.03% CPI1 1 0.03% DWF5 1 0.03% DWF7 1 0.03% HMGS 1 0.03% HMGR 1 0.03% DXR 1 0.03% CMK/IspE 1 0.03% HDS/IspG 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 344 19 BAHD (103) View species results
Alkaloid pathway 271 21 GES (42) View species results
Phenylpropanoid pathway 238 11 POD (88) View species results
Flavonoid pathway 119 10 UFGT (70) View species results
Rosmarinic acid pathway 107 7 C4H (57) View species results
Steroid pathway 62 11 CAS (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1533 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 178 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status Best Target
EVM0003576.mRNA1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
EVM0003755.mRNA1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
EVM0003845.mRNA1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
EVM0003949.mRNA1 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
EVM0004377.mRNA1 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
EVM0004668.mRNA1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
EVM0005294.mRNA1 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
EVM0006471.mRNA1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
EVM0006839.mRNA1 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
EVM0007616.mRNA1 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
EVM0007815.mRNA1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
EVM0007865.mRNA1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
EVM0009444.mRNA1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
EVM0010468.mRNA1 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
EVM0010670.mRNA1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
EVM0010710.mRNA1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
EVM0010732.mRNA1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
EVM0011969.mRNA1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
EVM0011986.mRNA1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
EVM0013267.mRNA1 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
EVM0013956.mRNA1 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
EVM0014370.mRNA1 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
EVM0014776.mRNA1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
EVM0014838.mRNA1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
EVM0014852.mRNA1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
EVM0015087.mRNA1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
EVM0015266.mRNA1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
EVM0015276.mRNA1 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
EVM0015282.mRNA1 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
EVM0015422.mRNA1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
EVM0015828.mRNA1 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
EVM0016033.mRNA1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
EVM0016222.mRNA1 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
EVM0016845.mRNA1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
EVM0017722.mRNA1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
EVM0000133.mRNA1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
EVM0000865.mRNA1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
EVM0003085.mRNA1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
EVM0003110_1.mRNA2 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
EVM0004726.mRNA1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
EVM0006121.mRNA1 Alkaloid T16H low borderline T16H__00001__sp_P98183_C71DC_CATRO
EVM0007823.mRNA1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
EVM0008748.mRNA1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
EVM0009133.mRNA1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
EVM0009511.mRNA1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
EVM0009965.mRNA1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
EVM0010488.mRNA1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
EVM0011970.mRNA1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
EVM0012647.mRNA1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
EVM0013378.mRNA1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO