PlantSME Plant secondary metabolism enzyme database

Artemisia tridentata (artemisia_tridentata)

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Imported from atlas release summary for Artemisia tridentata.

1772
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 32.45% Alkaloid pathway 20.03% Phenylpropanoid pathway 19.81% Flavonoid pathway 13.04% Rosmarinic acid pathway 9.26% Steroid pathway 5.42%
Family Distribution
C4H 7.48% C3'H/CYP98A 6.97% CYP76 5.41% BAHD 5.18% UGT 4.48% IFS 4.37% 7DLGT 4.03% T3O 3.76%
Other Families 58.32%
More Families (96)
UFGT 176 3.72% POD 156 3.3% 4CL 132 2.79% BR6OX2/CYP85A2 130 2.75% NMT 111 2.34% F3'H/CYP75B 108 2.28% DWF4/CYP90B1 98 2.07% F3H 89 1.88% CAS 64 1.35% CODM/T6ODM 62 1.31% GES 61 1.29% TPS 61 1.29% IO 59 1.25% CYP71 58 1.23% SMT1/SMT2/SMT3 56 1.18% STR 54 1.14% G8O/G8H 53 1.12% TRI/TRII 50 1.06% CYP90D1 50 1.06% CAD 48 1.01% CSE 47 0.99% COMT 46 0.97% TAT 43 0.91% BBE 41 0.87% F3'5'H/CYP75A 38 0.8% LAC 38 0.8% H6H 37 0.78% T16H 36 0.76% FNS 35 0.74% F5H/CYP84A 35 0.74% SLS 34 0.72% GS 34 0.72% IFR 32 0.68% SGD 31 0.65% 16OMT 30 0.63% CPD/CYP90A1 30 0.63% 7DLH 28 0.59% HCT 26 0.55% PYKS 24 0.51% CYP51G1 24 0.51% CCoAOMT 23 0.49% AACT 23 0.49% NCS 18 0.38% 8HGO 18 0.38% ANS/LDOX 17 0.36% FPPS 17 0.36% CYP80B1 15 0.32% BR6OX1/CYP85A1 15 0.32% PMT 14 0.3% CPR 14 0.3% RAS 14 0.3% ROT3/CYP90C1 13 0.27% LAMT 12 0.25% ANR 12 0.25% CYP719 11 0.23% CHI 11 0.23% COR 10 0.21% PAL 9 0.19% MPO 8 0.17% CHS 8 0.17% HPPR 8 0.17% DFR 7 0.15% CCR 7 0.15% SQS/FDFT1 7 0.15% DET2 7 0.15% ISY 6 0.13% CYP80F1 6 0.13% DXR 5 0.11% MVD 5 0.11% HDR/IspH 5 0.11% TYDC_DDC 4 0.08% SQE 4 0.08% MVK 4 0.08% HMGR 4 0.08% GGPPS 4 0.08% XMT_MXMT_DXMT 3 0.06% PMK 3 0.06% CNMT 2 0.04% CPI1 2 0.04% FK 2 0.04% SMO1/SMO2 2 0.04% HYD1 2 0.04% IDI 2 0.04% 6OMT_4OMT_SOMT 1 0.02% TDC 1 0.02% ADC 1 0.02% FLS 1 0.02% DWF5 1 0.02% DWF1 1 0.02% DWF7 1 0.02% MCT/IspD 1 0.02% DXS 1 0.02% MDS/IspF 1 0.02% HDS/IspG 1 0.02% CMK/IspE 1 0.02% HMGS 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 575 17 UGT (190) View species results
Alkaloid pathway 355 19 7DLGT (88) View species results
Phenylpropanoid pathway 351 11 POD (134) View species results
Flavonoid pathway 231 11 UFGT (162) View species results
Rosmarinic acid pathway 164 7 C4H (95) View species results
Steroid pathway 96 13 CAS (41) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2166 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 285 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FPPS
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Gene Pathway Family Confidence Status
artemisia_tridentata_ANN00420-RA Terpenoid FPPS low borderline
artemisia_tridentata_ANN00421-RA Terpenoid FPPS medium borderline
artemisia_tridentata_ANN05061-RA Terpenoid FPPS medium pass
artemisia_tridentata_ANN06109-RA Terpenoid FPPS medium pass
artemisia_tridentata_ANN13104-RA Terpenoid FPPS low borderline
artemisia_tridentata_ANN13211-RA Terpenoid FPPS low borderline
artemisia_tridentata_ANN13214-RA Terpenoid FPPS medium pass
artemisia_tridentata_ANN19251-RA Terpenoid FPPS low borderline
artemisia_tridentata_ANN19252-RA Terpenoid FPPS low borderline
artemisia_tridentata_ANN23347-RA Terpenoid FPPS medium pass
artemisia_tridentata_ANN28019-RA Terpenoid FPPS medium pass
artemisia_tridentata_ANN31635-RA Terpenoid FPPS medium pass
artemisia_tridentata_ANN31637-RA Terpenoid FPPS medium pass
artemisia_tridentata_ANN42009-RA Terpenoid FPPS low borderline
artemisia_tridentata_ANN42220-RA Terpenoid FPPS medium borderline
artemisia_tridentata_ANN42223-RA Terpenoid FPPS medium borderline
artemisia_tridentata_ANN42552-RA Terpenoid FPPS medium pass