Artemisia tridentata (artemisia_tridentata)
/
Imported from atlas release summary for Artemisia tridentata.
1772
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1772
Candidate Genes
C4H
7.48%
C3'H/CYP98A
6.97%
CYP76
5.41%
BAHD
5.18%
UGT
4.48%
IFS
4.37%
7DLGT
4.03%
T3O
3.76%
Other Families
58.32%
More Families (96)
UFGT
176
3.72%
POD
156
3.3%
4CL
132
2.79%
BR6OX2/CYP85A2
130
2.75%
NMT
111
2.34%
F3'H/CYP75B
108
2.28%
DWF4/CYP90B1
98
2.07%
F3H
89
1.88%
CAS
64
1.35%
CODM/T6ODM
62
1.31%
GES
61
1.29%
TPS
61
1.29%
IO
59
1.25%
CYP71
58
1.23%
SMT1/SMT2/SMT3
56
1.18%
STR
54
1.14%
G8O/G8H
53
1.12%
TRI/TRII
50
1.06%
CYP90D1
50
1.06%
CAD
48
1.01%
CSE
47
0.99%
COMT
46
0.97%
TAT
43
0.91%
BBE
41
0.87%
F3'5'H/CYP75A
38
0.8%
LAC
38
0.8%
H6H
37
0.78%
T16H
36
0.76%
FNS
35
0.74%
F5H/CYP84A
35
0.74%
SLS
34
0.72%
GS
34
0.72%
IFR
32
0.68%
SGD
31
0.65%
16OMT
30
0.63%
CPD/CYP90A1
30
0.63%
7DLH
28
0.59%
HCT
26
0.55%
PYKS
24
0.51%
CYP51G1
24
0.51%
CCoAOMT
23
0.49%
AACT
23
0.49%
NCS
18
0.38%
8HGO
18
0.38%
ANS/LDOX
17
0.36%
FPPS
17
0.36%
CYP80B1
15
0.32%
BR6OX1/CYP85A1
15
0.32%
PMT
14
0.3%
CPR
14
0.3%
RAS
14
0.3%
ROT3/CYP90C1
13
0.27%
LAMT
12
0.25%
ANR
12
0.25%
CYP719
11
0.23%
CHI
11
0.23%
COR
10
0.21%
PAL
9
0.19%
MPO
8
0.17%
CHS
8
0.17%
HPPR
8
0.17%
DFR
7
0.15%
CCR
7
0.15%
SQS/FDFT1
7
0.15%
DET2
7
0.15%
ISY
6
0.13%
CYP80F1
6
0.13%
DXR
5
0.11%
MVD
5
0.11%
HDR/IspH
5
0.11%
TYDC_DDC
4
0.08%
SQE
4
0.08%
MVK
4
0.08%
HMGR
4
0.08%
GGPPS
4
0.08%
XMT_MXMT_DXMT
3
0.06%
PMK
3
0.06%
CNMT
2
0.04%
CPI1
2
0.04%
FK
2
0.04%
SMO1/SMO2
2
0.04%
HYD1
2
0.04%
IDI
2
0.04%
6OMT_4OMT_SOMT
1
0.02%
TDC
1
0.02%
ADC
1
0.02%
FLS
1
0.02%
DWF5
1
0.02%
DWF1
1
0.02%
DWF7
1
0.02%
MCT/IspD
1
0.02%
DXS
1
0.02%
MDS/IspF
1
0.02%
HDS/IspG
1
0.02%
CMK/IspE
1
0.02%
HMGS
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 575 | 17 | UGT (190) | View species results |
| Alkaloid pathway | 355 | 19 | 7DLGT (88) | View species results |
| Phenylpropanoid pathway | 351 | 11 | POD (134) | View species results |
| Flavonoid pathway | 231 | 11 | UFGT (162) | View species results |
| Rosmarinic acid pathway | 164 | 7 | C4H (95) | View species results |
| Steroid pathway | 96 | 13 | CAS (41) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2166 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 285 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| artemisia_tridentata_ANN00793-RA | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| artemisia_tridentata_ANN00932-RA | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| artemisia_tridentata_ANN00933-RA | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| artemisia_tridentata_ANN03391-RA | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| artemisia_tridentata_ANN05883-RA | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| artemisia_tridentata_ANN07309-RA | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| artemisia_tridentata_ANN07761-RA | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| artemisia_tridentata_ANN07762-RA | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| artemisia_tridentata_ANN16308-RA | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| artemisia_tridentata_ANN16309-RA | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| artemisia_tridentata_ANN18877-RA | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| artemisia_tridentata_ANN22341-RA | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| artemisia_tridentata_ANN23217-RA | Alkaloid | NCS | low | borderline | NCS__00005__sp_Q67A25_NCS_THLFG |
| artemisia_tridentata_ANN24316-RA | Alkaloid | NCS | medium | pass | NCS__00004__sp_Q4QTJ2_NCS1_PAPSO |
| artemisia_tridentata_ANN24317-RA | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| artemisia_tridentata_ANN24320-RA | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| artemisia_tridentata_ANN39410-RA | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| artemisia_tridentata_ANN41946-RA | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |