Asparagus officinalis (asparagus_officinalis)
Imported from atlas release summary for Asparagus officinalis.
1110
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1110
Candidate Genes
BAHD
6.25%
4CL
6.09%
C4H
5.94%
C3'H/CYP98A
5.49%
POD
4.36%
UGT
3.72%
IFS
3.54%
7DLGT
2.86%
Other Families
61.74%
More Families (97)
T3O
76
2.86%
CYP76
75
2.82%
UFGT
69
2.6%
F3H
67
2.52%
DWF4/CYP90B1
61
2.29%
STR
56
2.11%
NMT
53
1.99%
F3'H/CYP75B
48
1.81%
H6H
47
1.77%
CYP71
47
1.77%
BR6OX2/CYP85A2
43
1.62%
SMT1/SMT2/SMT3
40
1.5%
SGD
36
1.35%
LAC
35
1.32%
CAS
32
1.2%
CODM/T6ODM
30
1.13%
CSE
30
1.13%
TRI/TRII
29
1.09%
CAD
29
1.09%
PMT
26
0.98%
T16H
25
0.94%
IFR
25
0.94%
PYKS
24
0.9%
HCT
24
0.9%
RAS
24
0.9%
IO
21
0.79%
FNS
20
0.75%
TPS
20
0.75%
GS
19
0.71%
CYP90D1
19
0.71%
16OMT
18
0.68%
G8O/G8H
18
0.68%
PAL
18
0.68%
SLS
17
0.64%
CCR
17
0.64%
ANR
16
0.6%
COMT
16
0.6%
CPR
16
0.6%
GES
15
0.56%
NCS
15
0.56%
CPD/CYP90A1
15
0.56%
7DLH
14
0.53%
COR
14
0.53%
DFR
14
0.53%
CYP51G1
14
0.53%
BBE
13
0.49%
BR6OX1/CYP85A1
13
0.49%
FPPS
13
0.49%
F5H/CYP84A
12
0.45%
F3'5'H/CYP75A
11
0.41%
ANS/LDOX
11
0.41%
8HGO
10
0.38%
CNMT
9
0.34%
CHS
8
0.3%
ISY
7
0.26%
CCoAOMT
7
0.26%
TAT
7
0.26%
ROT3/CYP90C1
7
0.26%
LAMT
6
0.23%
CHI
6
0.23%
FLS
6
0.23%
SQS/FDFT1
6
0.23%
MVD
6
0.23%
MPO
5
0.19%
CYP719
5
0.19%
CYP80B1
5
0.19%
SMO1/SMO2
5
0.19%
SQE
5
0.19%
GGPPS
5
0.19%
MVK
5
0.19%
TYDC_DDC
4
0.15%
TDC
4
0.15%
DWF1
4
0.15%
DXS
4
0.15%
AACT
4
0.15%
HMGR
4
0.15%
ADC
3
0.11%
HPPR
3
0.11%
DWF7
3
0.11%
MCT/IspD
3
0.11%
6OMT_4OMT_SOMT
2
0.08%
FK
2
0.08%
HYD1
2
0.08%
DET2
2
0.08%
CMK/IspE
2
0.08%
IDI
2
0.08%
PMK
2
0.08%
HMGS
2
0.08%
CYP80F1
1
0.04%
ODC
1
0.04%
DWF5
1
0.04%
CPI1
1
0.04%
DXR
1
0.04%
HDS/IspG
1
0.04%
HDR/IspH
1
0.04%
GPPS
1
0.04%
MDS/IspF
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 289 | 19 | BAHD (127) | View species results |
| Phenylpropanoid pathway | 265 | 11 | POD (102) | View species results |
| Alkaloid pathway | 218 | 20 | NMT (33) | View species results |
| Flavonoid pathway | 139 | 11 | UFGT (61) | View species results |
| Rosmarinic acid pathway | 122 | 7 | C4H (44) | View species results |
| Steroid pathway | 77 | 11 | SMT1/SMT2/SMT3 (28) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 945 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 214 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Aoff01G0025690.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| Aoff02G0003300.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| Aoff02G0006060.1 | Phenylpropanoid | CAD | low | borderline | CAD__00003__sp_A0A2P1GIW4_REDX1_CATRO |
| Aoff02G0015820.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| Aoff02G0015830.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| Aoff03G0008610.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| Aoff03G0014310.1 | Phenylpropanoid | CAD | low | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| Aoff03G0014960.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| Aoff03G0026150.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| Aoff04G0000510.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| Aoff04G0009940.1 | Phenylpropanoid | CAD | medium | pass | CAD__00016__sp_Q9SJ10_CADH3_ARATH |
| Aoff04G0010290.1 | Phenylpropanoid | CAD | low | borderline | CAD__00011__sp_Q02971_CADH7_ARATH |
| Aoff04G0016190.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| Aoff05G0006210.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| Aoff05G0028580.1 | Phenylpropanoid | CAD | medium | pass | CAD__00007__sp_O24562_CADH_MAIZE |
| Aoff06G0001340.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| Aoff06G0002310.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| Aoff06G0002330.1 | Phenylpropanoid | CAD | medium | pass | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| Aoff06G0002360.1 | Phenylpropanoid | CAD | medium | pass | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| Aoff06G0002780.1 | Phenylpropanoid | CAD | medium | pass | CAD__00013__sp_Q0JA75_CADH7_ORYSJ |
| Aoff07G0019820.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| Aoff07G0022590.1 | Phenylpropanoid | CAD | medium | pass | CAD__00009__sp_P42734_CADH9_ARATH |
| Aoff07G0033950.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| Aoff08G0020090.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| Aoff08G0022880.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| Aoff08G0025020.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| Aoff10G0001150.1 | Phenylpropanoid | CAD | low | borderline | CAD__00001__sp_A0A072VPZ8_CAD1_MEDTR |
| Aoff10G0001780.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| AoffAsparagusV1_Un3510003510.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |